Pairwise Alignments

Query, 752 a.a., DEAD/DEAH box helicase from Methanococcus maripaludis S2

Subject, 444 a.a., ATP-dependent RNA helicase SrmB from Escherichia coli ECRC101

 Score = 48.5 bits (114), Expect = 7e-10
 Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 17/160 (10%)

Query: 309 AKEITNDPRFIQAVKNLNELDIEHPKY------EKMLEIVKEILKENE--KIVIFAQYRD 360
           A+ +  DP  + A  +  E    H  Y      E    ++  +LK+ E  + ++F + R+
Sbjct: 200 AERLLEDPVEVSANPSTRERKKIHQWYYRADDLEHKTALLVHLLKQPEATRSIVFVRKRE 259

Query: 361 TVQKIVDLLSENEIEAIMFVGQSNKDGKGMSQKEQAKAIEKF-KNEANVLVSTSVSEEGI 419
            V ++ + L E  I      G+       M Q ++ +AI++  +   NVLV+T V+  GI
Sbjct: 260 RVHELANWLREAGINNCYLEGE-------MVQGKRNEAIKRLTEGRVNVLVATDVAARGI 312

Query: 420 DISSVNYVLFYEPVPSEIRMIQRRGRAAR-GEGGQVIVLI 458
           DI  V++V  ++   S    + R GR AR G  G  I L+
Sbjct: 313 DIPDVSHVFNFDMPRSGDTYLHRIGRTARAGRKGTAISLV 352