Pairwise Alignments

Query, 752 a.a., DEAD/DEAH box helicase from Methanococcus maripaludis S2

Subject, 450 a.a., ATP-dependent RNA helicase SrmB from Dickeya dianthicola ME23

 Score = 47.4 bits (111), Expect = 2e-09
 Identities = 42/157 (26%), Positives = 78/157 (49%), Gaps = 29/157 (18%)

Query: 309 AKEITNDPRFIQAVKNLNEL-----------DIEHPKYEKMLEIVKEILKENE--KIVIF 355
           A  + NDP  ++A  +  E            D++H        ++  +LK+ +  + ++F
Sbjct: 200 ADRLLNDPIKVEADPSRRERKKILQWYYRADDVQHKT-----ALLSHLLKQPDVTRSIVF 254

Query: 356 AQYRDTVQKIVDLLSENEIEAIMFVGQSNKDGKGMSQKEQAKAIEKF-KNEANVLVSTSV 414
            + R+ V ++VD L    IE+    G+       M Q ++ +AI++  +   NVLV+T V
Sbjct: 255 VRKRERVHELVDWLRSVGIESCYLEGE-------MVQAKRNEAIKRLSEGRVNVLVATDV 307

Query: 415 SEEGIDISSVNYVLFYE-PVPSEIRM--IQRRGRAAR 448
           +  G+DI  V++V  ++ P  S++ +  I R GRA R
Sbjct: 308 AARGLDIQDVSHVFNFDLPRTSDVYLHRIGRTGRAGR 344