Pairwise Alignments

Query, 752 a.a., DEAD/DEAH box helicase from Methanococcus maripaludis S2

Subject, 383 a.a., ATP-dependent RNA helicase RhlB from Acinetobacter radioresistens SK82

 Score = 60.5 bits (145), Expect = 2e-13
 Identities = 38/143 (26%), Positives = 79/143 (55%), Gaps = 12/143 (8%)

Query: 340 EIVKEILKEN--EKIVIFAQYRDTVQKIVDLLSENEIEAIMFVGQSNKDGKGMSQKEQAK 397
           ++++EIL++   EK++IFA  RD V+++ D L ++  + +M  G+       ++Q ++ K
Sbjct: 240 KLLQEILRDEPIEKVMIFANRRDQVRRLYDHLKKDGYKVVMLSGE-------IAQDKRLK 292

Query: 398 AIEKFKN-EANVLVSTSVSEEGIDISSVNYVLFYEPVPSEIRMIQRRGRAARGEGGQVIV 456
            +++FKN + N++++T V+  GI + +V++V+ +         + R GR   G  G   V
Sbjct: 293 MLDQFKNGKHNIMIATDVAGRGIHVDNVSHVINFTLPEQSDDYVHRIGRT--GRAGAQGV 350

Query: 457 LIAQKTRDEGYYRAGLAKEKNMK 479
            I+  + D+ +Y   + K    K
Sbjct: 351 SISFLSEDDAFYLPAIEKAIGQK 373



 Score = 26.2 bits (56), Expect = 0.003
 Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 9/80 (11%)

Query: 59  KVLIIAPSRPLVDQHFKSMNQFLNIDSEKIVILNGKISPKKREAM---WESGK--IFIAT 113
           KV+I A  R  V    + +   L  D  K+V+L+G+I+  KR  M   +++GK  I IAT
Sbjct: 253 KVMIFANRRDQV----RRLYDHLKKDGYKVVMLSGEIAQDKRLKMLDQFKNGKHNIMIAT 308

Query: 114 PQVAENDIISKILKPSQFSL 133
                   +  +     F+L
Sbjct: 309 DVAGRGIHVDNVSHVINFTL 328