Pairwise Alignments

Query, 228 a.a., coenzyme F420 hydrogenase subunit gamma from Methanococcus maripaludis S2

Subject, 263 a.a., NADH-quinone oxidoreductase subunit B family protein from Dickeya dianthicola ME23

 Score = 45.8 bits (107), Expect = 8e-10
 Identities = 53/206 (25%), Positives = 78/206 (37%), Gaps = 31/206 (15%)

Query: 4   VAHVQLSSCCGCLVSLADTYEQLLDVLG-AIDLVYSQTLADVREIPDDVDIVLLEGSVCL 62
           V  V    C GC + +      L D     I +V S         P   DI+L  G+V  
Sbjct: 39  VYRVDCGGCNGCEIEIFSAITPLFDAERFGIKVVAS---------PRHADILLFTGAVTR 89

Query: 63  SDHHAMEVALESRKKGKILVALGACAASGNITRFSKGNQPSKPVHDSF---APLTEVVKC 119
           +       A ES    KI ++ GAC   G I             HD +       ++V  
Sbjct: 90  AMRSPALRAYESAPDPKICISYGACGCGGGI------------FHDLYCVWGGSDKIVPI 137

Query: 120 DLAIPGCPPSPESIV---AVVLAALNGDM---EYLEPYAELAKYGSEACGCDLIVKVINK 173
           D+ IPGCPP+P + +   AV L  L   +   ++ +   E A     A   DL V+V  +
Sbjct: 138 DVYIPGCPPTPAATIYGFAVALGLLEQKLHGSDHQQAEQEQATLIHPAVPLDLRVRVERE 197

Query: 174 SLCMGCGSCAAACPTRAVSMDAGRPL 199
           +  M           R + + A +PL
Sbjct: 198 ARLMAGYRQGREISDRFLDLLANQPL 223