Pairwise Alignments

Query, 422 a.a., MBL fold metallo-hydrolase from Methanococcus maripaludis S2

Subject, 360 a.a., mRNA 3-end processing factor from Variovorax sp. SCN45

 Score = 48.5 bits (114), Expect = 3e-10
 Identities = 49/221 (22%), Positives = 92/221 (41%), Gaps = 30/221 (13%)

Query: 48  VDAVVVSHAHLDHCGAIPYFNFKKIFCNPPTADLMYNVWKDTVSLSKTYKEEDIKKSMDV 107
           V   V++HAH DH                 T    Y    D+    +T    DI      
Sbjct: 32  VARAVITHAHSDHAR---------------TGHAHYLAHTDSAGTLRTRLGADID----- 71

Query: 108 IKTVNYREEKQVTSDIKMKMYDAGHILGSSSLYLDIDGKKLLYTGDINEIETRTLRAADT 167
           ++T+ Y E       +++ ++ AGH+LGS+ + L+  G+  + +GD       T   A  
Sbjct: 72  LQTLAYGEAIS-HHGVRVSLHPAGHVLGSAQVRLEHGGRVWVASGDYKTEPDGT--CAPF 128

Query: 168 DFDEIDTIIIESTYGSPLDIKPARKVLEKQLIDEISETIDNGGKVIIPVFAVGRSQEIIV 227
           +    DT I EST+G P++  P +  L  ++        + G   ++  +A G++Q I+ 
Sbjct: 129 EPVPCDTFITESTFGLPINRWPTQAALFAEIDAWWRANAEAGRASVLFCYAFGKAQRILH 188

Query: 228 VINNYMKSGALKEVPIYINGSLTHTTGMYMGYSDWLNPKIK 268
            ++  +        PI ++G++     +Y      L P ++
Sbjct: 189 GVDAGIG-------PIVVHGAVEPLNAVYRAAGVALPPTLR 222