Pairwise Alignments

Query, 422 a.a., MBL fold metallo-hydrolase from Methanococcus maripaludis S2

Subject, 466 a.a., Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  171 bits (432), Expect = 6e-47
 Identities = 140/465 (30%), Positives = 217/465 (46%), Gaps = 55/465 (11%)

Query: 5   KFHGGCHQIGKSCVEINTKKSKILIDCGMDPSDNGLPD-------INDSDVDAVVVSHAH 57
           KF GG   +  S   +   K+KILIDCG+      L         I+ + +D V+++HAH
Sbjct: 6   KFLGGAQTVTGSRYLLEIDKTKILIDCGLFQGIKELRKRNWDPFPISAAAIDMVLLTHAH 65

Query: 58  LDHCGAIPYF---NFK-KIFCNPPTADLMYNVWKDTVSL-------------------SK 94
           +DH G +P      FK  I    PT DL+  +  D   L                   S 
Sbjct: 66  IDHSGYLPKLVKEGFKGPILLTEPTMDLVKTLLLDAGKLQEEEAEYAKRKGFSKHEDPSP 125

Query: 95  TYKEEDIKKSMDVIKTVNYREEKQVTSDIKMKMYDAGHILGSSSLYLDIDG----KKLLY 150
            Y  ED ++  D +  +++ +   +T    +  Y+AGHILG++ L + + G    K +++
Sbjct: 126 LYTMEDAEEVFDQLSPISFDQPISLTPKATLTAYNAGHILGAAILKIQVRGNHQTKTIVF 185

Query: 151 TGDINEIETRTLRAADTDFDEIDTIIIESTYGSPLDIKPARKVLEKQLIDEISETIDNGG 210
           +GD+    T  L        + D + IESTYG+           EK L   I+ET   GG
Sbjct: 186 SGDLGRY-TDPLLNPPIGLPKADILFIESTYGNR---SHETNGPEKLLAGAINETYQKGG 241

Query: 211 KVIIPVFAVGRSQEIIVVINNYMKSGALKEVPIYINGSLT-HTTGMYMGYSDW--LNPKI 267
             +IP FAVGR+Q ++  +    + G + ++PIY++  +    T +Y  +  +  L P +
Sbjct: 242 VAVIPAFAVGRTQLVLYYLYKLQQKGMIPQIPIYVDSPMAIDVTKLYKDHLAYHRLGPSL 301

Query: 268 KNAIENRINPFG--NLIKGGDEVFS------REPCIIISTSGMVQGGPVLQYL-SLLKNP 318
           +   E+  NPF   NL     +  S      R   IIIS SGM  GG +L +L + L N 
Sbjct: 302 Q---EDGTNPFSHKNLHYYQSQEASMSLNNIRGDAIIISASGMATGGRILHHLYNRLPNE 358

Query: 319 RNKIILTGYQAEGTIGRSLEEGATEVKPFKRAIPVNGKVVKIE-FSAHADYNSLLRFMKK 377
            + II  GYQA+GT GR L +G   V+ +   +P    +  I+  SAHAD + LLR+   
Sbjct: 359 NDSIIFVGYQAKGTRGRKLLDGEERVRMYGIDVPAKASIHYIDGLSAHADQDELLRWADC 418

Query: 378 IPQ-PDKAIVMHGERYQALSLAMTIWKTLKIPALAPSIGSVLPLF 421
           I + P    V+HGE+  + + A T+ +T     + P       LF
Sbjct: 419 IAEKPKLTFVVHGEQEVSAAFAHTLKETFGWNTIVPDYLESFELF 463