Pairwise Alignments

Query, 242 a.a., ribonuclease HII from Methanococcus maripaludis S2

Subject, 236 a.a., Ribonuclease HII (EC 3.1.26.4) from Variovorax sp. SCN45

 Score = 54.7 bits (130), Expect = 2e-12
 Identities = 50/172 (29%), Positives = 81/172 (47%), Gaps = 26/172 (15%)

Query: 22  IIVGLDEAGRGPVLGPMVIASVKIDEKNLYKLNDLELKDSKQLSKKKREELY--IIINEM 79
           ++ G+DEAGRGP+ GP+V A+V +D+    +     L DSK L+  +RE L+  I+   +
Sbjct: 15  LLAGVDEAGRGPLAGPVVAAAVILDDLRPIR----GLADSKTLTALQRERLHDQILAKAL 70

Query: 80  CDVEKIVIDPETIDKQMEIINLNKIELSAFSKLSNHFIRENDNISIYIDACSSSEQSFSN 139
           C      I   T+D +++  N+ +  + A  +             + +D           
Sbjct: 71  C----CSIAQATVD-EIDTHNILQATMLAMRRAVEGL--RLKPAKVLVDG---------- 113

Query: 140 QFKAKLINKNVEIIAEHKADENYKIVSAASIIAKVTRDRVIEEYKETFGEIG 191
               +L   +V   A  K D   K +SAASI+AKV RDR+ E+    F + G
Sbjct: 114 ---NRLPTLDVLAEAIVKGDARVKAISAASILAKVHRDRLCEQLHAEFPDYG 162