Pairwise Alignments

Query, 242 a.a., ribonuclease HII from Methanococcus maripaludis S2

Subject, 207 a.a., Ribonuclease HII from Pseudomonas putida KT2440

 Score = 52.8 bits (125), Expect = 5e-12
 Identities = 53/187 (28%), Positives = 84/187 (44%), Gaps = 38/187 (20%)

Query: 20  EKIIVGLDEAGRGPVLGPMVIASVKIDEKNLYKLNDLELKDSKQLSKKKREELYIIINEM 79
           E ++ G+DE GRGP+ G +V A+V +D         L L DSK+L++ +RE L+   +E+
Sbjct: 11  EDLVAGVDEVGRGPLCGAVVTAAVILDPARPI----LGLNDSKKLTEARREALF---DEI 63

Query: 80  CDVEKIVIDPETIDKQMEIINLNKIELSAFSKLSNHFIRENDNISIYIDACSSSEQSFSN 139
           C  EK +       +  EI +LN ++ +                     A   + +    
Sbjct: 64  C--EKALSFCIARAEVEEIDSLNILQATML-------------------AMQRAVEGLHI 102

Query: 140 QFKAKLINKN------VEIIAEHKADENYKIVSAASIIAKVTRDRVIEEYKETFGEIG-- 191
             K  LI+ N      V      K D     ++AASI+AKVTRDR +  ++  +   G  
Sbjct: 103 TPKLALIDGNRCPKLAVPAAPVVKGDSQVPAIAAASILAKVTRDREMSAFELIYPGYGIG 162

Query: 192 --SGYPS 196
              GYP+
Sbjct: 163 GHKGYPT 169