Pairwise Alignments

Query, 242 a.a., ribonuclease HII from Methanococcus maripaludis S2

Subject, 190 a.a., Ribonuclease HII from Alteromonas macleodii MIT1002

 Score = 58.2 bits (139), Expect = 1e-13
 Identities = 65/216 (30%), Positives = 98/216 (45%), Gaps = 34/216 (15%)

Query: 21  KIIVGLDEAGRGPVLGPMVIASVKIDEKNLYKLNDLELKDSKQLSKKKREELYIIINEMC 80
           K+I G+DE GRGP++G +V A+V +D +N  +     L DSK+LS+KKR  L   I E  
Sbjct: 3   KLIAGVDEVGRGPLVGDVVTAAVILDPENPIE----GLTDSKKLSEKKRVALAQEIREKA 58

Query: 81  DVEKI-VIDPETIDKQMEIINLNKIELSAFSKLSNHFIRENDNISIYIDACSSSEQSFSN 139
               I    PE IDK + I++   + +          IR  + + +  D        F  
Sbjct: 59  LYWNIGRASPEEIDK-LNILHATMLAM----------IRAVEGLPVKPD--------FVR 99

Query: 140 QFKAKLINKNVEIIAEHKADENYKIVSAASIIAKVTRDRVIEEYKETFGEIG----SGYP 195
               ++   N E  A  K D  +  +SAASIIAKV RD  +    E + +       GYP
Sbjct: 100 VDGNRVPAWNFESEAVVKGDSLHAEISAASIIAKVERDNDMILLHEVYPQYNFAGHKGYP 159

Query: 196 SDPKTKKFLKNYVYENRTLPKIARKSWATSKNLLKE 231
           +    +   +  + +        RKS+   K LL+E
Sbjct: 160 TKAHFEAIAEYGILD------CYRKSFKPVKALLEE 189