Pairwise Alignments

Query, 727 a.a., elongation factor EF-2 from Methanococcus maripaludis S2

Subject, 606 a.a., ribosome associated GTPase from Pseudomonas putida KT2440

 Score =  159 bits (402), Expect = 4e-43
 Identities = 131/474 (27%), Positives = 217/474 (45%), Gaps = 106/474 (22%)

Query: 19  EQIRNMGICAHIDHGKTTLSDNLLAGAGMISKELAGDQLALDFDEEEAARGITIYAANVS 78
           E +RN+ I AH+DHGKTTL D LL  +G + +    D+  +D +++E  RGITI A N +
Sbjct: 3   ENLRNIAIIAHVDHGKTTLVDKLLRQSGTLERNELNDERVMDSNDQEKERGITILAKNTA 62

Query: 79  MVHEYSGKEYLINLIDTPGHVDFGGDVTRAMRAIDGAVVVCCAVEGVMPQTETVLRQALK 138
           +   ++G  Y IN++DTPGH DFGG+V R M  +D  +++  A +G MPQT  V ++A +
Sbjct: 63  I--NWNG--YHINIVDTPGHADFGGEVERVMSMVDSVLLLVDAQDGPMPQTRFVTKKAFE 118

Query: 139 EKVKPVLFINKVDRLINELKLTPEELQGRFMKIIAEVNKLIEKMAPEEFKKEWLCDVANG 198
             +KP++ INKVDR              R   ++ ++  L + +   + + ++       
Sbjct: 119 AGLKPIVVINKVDR-----------PGARPDWVLDQIFDLFDNLGATDEQLDF------- 160

Query: 199 KVAFGSAYNNWAISVPYMQRSGISFKDIIDYCEQENQKELAEKAPLHEVVLDMSIKHLPN 258
           KV + SA N            GI+  D     E        +  PL++ ++D    ++P 
Sbjct: 161 KVVYASALN------------GIAGLDHTAMAE--------DMTPLYQSIVD----NVPA 196

Query: 259 PLTAQKYRIPNIWKGDAESTIGKSMVACDPNGPLAGVVTKIIVDKHAGAISACRLFSGRI 318
           P                         + D +GP    ++ +  +   G I   R+  GR+
Sbjct: 197 P-------------------------SVDRDGPFQMQISALDYNSFLGVIGVGRIARGRV 231

Query: 319 KQGDDLYLV---GSKQKARAQQVSIFMGAERVQVPSISAGNICALTGLREATAGETVCSP 375
           K    +  +   G K+  R  ++    G  RV V    AG+I  ++G  E    +T+C+P
Sbjct: 232 KPNTPVVAIDTNGKKRNGRILKLMGHHGLHRVDVEEAQAGDIVCISGFDELFISDTLCAP 291

Query: 376 S--EILEPGFESLSHTSEPVITVA---------------IEAKNTKD-LPKLIEILRQIA 417
              E ++P         EP +++                + ++N KD L K  E+L  +A
Sbjct: 292 DAVEAMKP-----LTVDEPTVSMTFQVNDSPFCGKEGKFVTSRNIKDRLDK--ELLYNVA 344

Query: 418 REDNTVRVEINEETGEHLISGMGELHIEVITNTKIGRDGGIEVDVGEPIVVYRE 471
                +RV+  +   +  +SG GELH+ V+  T   R  G E+ VG P V+ RE
Sbjct: 345 -----LRVQETDSPDKFKVSGRGELHLSVLIETM--RREGFEMAVGRPEVIIRE 391



 Score = 35.8 bits (81), Expect = 6e-06
 Identities = 19/85 (22%), Positives = 42/85 (49%), Gaps = 1/85 (1%)

Query: 621 VAQAKPVLLEPMQSVYINTPQDYMGDGMKEINNRRGQILDMEQEGDMSI-IKSSVPVAEM 679
           + +   V  EP ++V I+ P++  G  M+E+  R+G + +M  +G   + ++ ++P   +
Sbjct: 389 IREVDGVKQEPFENVTIDIPEESQGKVMEEMGLRKGDLTNMVPDGKGRVRLEYNIPARGL 448

Query: 680 FGFAGAIRGATQGRCLWSVEFSGFE 704
            GF       T G  + +  F  ++
Sbjct: 449 IGFRNQFLTLTNGAGILTSIFDRYD 473