Pairwise Alignments

Query, 386 a.a., DNA-directed RNA polymerase subunit A'' from Methanococcus maripaludis S2

Subject, 1397 a.a., DNA-directed RNA polymerase subunit beta' from Acinetobacter baumannii LAC-4

 Score = 59.7 bits (143), Expect = 5e-13
 Identities = 37/95 (38%), Positives = 55/95 (57%), Gaps = 13/95 (13%)

Query: 5   DLEKKLENSVLPP---LLKRELSEKILREEISEEYLVDEIISETT-----RAYERTL--- 53
           D+ +  ++ V+ P   L+  +++ ++    + E  +   I  E+T     + Y R L   
Sbjct: 852 DVRRASDDEVVLPRGTLIDEKIAAQLEEAGVDEVKVRSVIACESTFGVCAKCYGRDLARG 911

Query: 54  --VEPGEAVGVVAAQSIGEPGTQMTMRTFHYAGVA 86
             V PGE+VGV+AAQSIGEPGTQ+TMRTFH  G A
Sbjct: 912 HLVNPGESVGVMAAQSIGEPGTQLTMRTFHVGGAA 946



 Score = 41.6 bits (96), Expect = 1e-07
 Identities = 19/45 (42%), Positives = 31/45 (68%)

Query: 326  SVLARAAFEETVKHLYSASMRGYVDELGGVVENIIVGKPISMGTG 370
            S ++ A+F+ET + L  A++ G  D+L G+ EN++VG+ I  GTG
Sbjct: 1314 SFISAASFQETTRVLTEAAVTGKEDDLRGLKENVVVGRLIPAGTG 1358