Pairwise Alignments

Query, 499 a.a., DNA-directed RNA polymerase subunit B'' from Methanococcus maripaludis S2

Subject, 499 a.a., DNA-directed RNA polymerase subunit B'' from Methanococcus maripaludis S2

 Score =  991 bits (2562), Expect = 0.0
 Identities = 499/499 (100%), Positives = 499/499 (100%)

Query: 1   MESRVVVDAFFKENSLVKHHIDSYDDFVKNKIQRIIDEVTGVETEIKGGYKVSFGNVRVT 60
           MESRVVVDAFFKENSLVKHHIDSYDDFVKNKIQRIIDEVTGVETEIKGGYKVSFGNVRVT
Sbjct: 1   MESRVVVDAFFKENSLVKHHIDSYDDFVKNKIQRIIDEVTGVETEIKGGYKVSFGNVRVT 60

Query: 61  KPINKEADGSVKPITPMEARIRNLAYSAPLYLEMIPTVGEGEEEKVLSPVEVYIGELPVM 120
           KPINKEADGSVKPITPMEARIRNLAYSAPLYLEMIPTVGEGEEEKVLSPVEVYIGELPVM
Sbjct: 61  KPINKEADGSVKPITPMEARIRNLAYSAPLYLEMIPTVGEGEEEKVLSPVEVYIGELPVM 120

Query: 121 LGSEICHLCGKSAEELIKYGEDTQDPLGYFIVNGSEKAVVAQEDLIPNRIICEKVEKNNK 180
           LGSEICHLCGKSAEELIKYGEDTQDPLGYFIVNGSEKAVVAQEDLIPNRIICEKVEKNNK
Sbjct: 121 LGSEICHLCGKSAEELIKYGEDTQDPLGYFIVNGSEKAVVAQEDLIPNRIICEKVEKNNK 180

Query: 181 VVDIAKVFSTRHGFRALCTVERNPDGLLNVSFPGMPSTIPLVILMRALGAESDREIIELI 240
           VVDIAKVFSTRHGFRALCTVERNPDGLLNVSFPGMPSTIPLVILMRALGAESDREIIELI
Sbjct: 181 VVDIAKVFSTRHGFRALCTVERNPDGLLNVSFPGMPSTIPLVILMRALGAESDREIIELI 240

Query: 241 SDEPTVVMQLIANLQEAREEHAINTTEDALEHIGKRVAPGQPKEYKLKRAETILCNYLLP 300
           SDEPTVVMQLIANLQEAREEHAINTTEDALEHIGKRVAPGQPKEYKLKRAETILCNYLLP
Sbjct: 241 SDEPTVVMQLIANLQEAREEHAINTTEDALEHIGKRVAPGQPKEYKLKRAETILCNYLLP 300

Query: 301 HMGVESEKLGAKCKYLGRMAKNSIELYLGLRVEDDKDHYSNKRLKLAGDLMEDLFRHSFN 360
           HMGVESEKLGAKCKYLGRMAKNSIELYLGLRVEDDKDHYSNKRLKLAGDLMEDLFRHSFN
Sbjct: 301 HMGVESEKLGAKCKYLGRMAKNSIELYLGLRVEDDKDHYSNKRLKLAGDLMEDLFRHSFN 360

Query: 361 QLIKDIKYQLERQAIRNKEPSIQAAVRSDVLTERMRHAMATGNWVGGRTGVSQLLDRTSY 420
           QLIKDIKYQLERQAIRNKEPSIQAAVRSDVLTERMRHAMATGNWVGGRTGVSQLLDRTSY
Sbjct: 361 QLIKDIKYQLERQAIRNKEPSIQAAVRSDVLTERMRHAMATGNWVGGRTGVSQLLDRTSY 420

Query: 421 LATVSQLRRVVSPLSRSQPHFEARDLHATQWGKICPSETPEGPNCGLVKNLAVMCKVTTD 480
           LATVSQLRRVVSPLSRSQPHFEARDLHATQWGKICPSETPEGPNCGLVKNLAVMCKVTTD
Sbjct: 421 LATVSQLRRVVSPLSRSQPHFEARDLHATQWGKICPSETPEGPNCGLVKNLAVMCKVTTD 480

Query: 481 EGDDSVIELLKELGLTKEN 499
           EGDDSVIELLKELGLTKEN
Sbjct: 481 EGDDSVIELLKELGLTKEN 499