Pairwise Alignments

Query, 513 a.a., homocysteine biosynthesis protein from Methanococcus maripaludis S2

Subject, 413 a.a., CBS domain-containing protein from Methanococcus maripaludis S2

 Score = 70.5 bits (171), Expect = 1e-16
 Identities = 43/120 (35%), Positives = 68/120 (56%), Gaps = 5/120 (4%)

Query: 390 VKDILSRPVVVGSLNTSITQASRVLIENNINHLPIVDENGKLSGIITSWDIAKAMAQDK- 448
           V+D++ RP  V  +NT +  A+  +I +     P++DEN KL GIIT +D+ K  A+ + 
Sbjct: 63  VEDLMFRPFCV-KMNTQVIDAAFEMINSGQRVAPVIDENDKLIGIITDYDVMKCAAESEL 121

Query: 449 ---HSISEIMTTYIVSATPDETIDMAARKMSRNNISGLPVVDSNNKVLGVVSAEDISKLI 505
                I +IMT   V+   DE+I  A   M + NI  L V+D + K +G+V+ +DI K +
Sbjct: 122 LKDVKIDKIMTKSPVTIDIDESIGKARSLMMKYNIGRLIVLDMDGKPIGMVTEDDIVKKV 181



 Score = 35.8 bits (81), Expect = 3e-06
 Identities = 32/123 (26%), Positives = 62/123 (50%), Gaps = 4/123 (3%)

Query: 390 VKDILSRPVVVGSLNTSITQASRVLIENNINHLPIVDENGKLSGIITSWDIAKAMAQDKH 449
           V DI ++ VV  S +T I++A   + EN   H  IV+++  +  ++T  D+    +  + 
Sbjct: 5   VIDIATKDVVTVSPDTPISKAVGTM-ENKKFHNLIVEKDDDIY-LVTMHDLLLGNSVHQQ 62

Query: 450 SISEIMTTYIVSATPDETIDMAARKMSRNNISGLPVVDSNNKVLGVVSAEDISKLIGRNG 509
            + ++M          + ID AA +M  +     PV+D N+K++G+++  D+ K    + 
Sbjct: 63  -VEDLMFRPFCVKMNTQVID-AAFEMINSGQRVAPVIDENDKLIGIITDYDVMKCAAESE 120

Query: 510 LHK 512
           L K
Sbjct: 121 LLK 123



 Score = 35.4 bits (80), Expect = 4e-06
 Identities = 23/96 (23%), Positives = 47/96 (48%), Gaps = 4/96 (4%)

Query: 390 VKDILSRPVVVGSLNTSITQASRVLIENNINHLPIVDENGKLSGIITSWDIAKAMAQDKH 449
           V  I+++P++  ++  S+ + + +L + +I  +PI  +N  L GI+T  DI K +   + 
Sbjct: 205 VSMIINKPLITANIGDSVAEVAEILEQQDIRGIPIF-KNDTLRGIVTRLDILKYLRDLR- 262

Query: 450 SISEIMTTYIVSATPDETIDMAARKMSRNNISGLPV 485
             +E M    +    DE     A ++  N I  + +
Sbjct: 263 --AESMVEVEIQGDFDEDQRELAERILFNEIKKIAI 296