Pairwise Alignments

Query, 513 a.a., homocysteine biosynthesis protein from Methanococcus maripaludis S2

Subject, 331 a.a., capsule expression protein from Agrobacterium fabrum C58

 Score = 49.3 bits (116), Expect = 2e-10
 Identities = 34/124 (27%), Positives = 66/124 (53%), Gaps = 4/124 (3%)

Query: 385 AKMKLVKDILSRPVVVGSLN--TSITQASRVLIENNINHLPIVDENGKLSGIITSWDIAK 442
           A + LV DI+     V  +N  T++ +A  VL   +   + I+DE+G+L GI+T  D+A+
Sbjct: 205 ASLTLVSDIMHTGDRVPLVNKGTAMPEAVGVLSRKHFGCVGILDEDGRLCGIVTEGDMAR 264

Query: 443 AMAQD--KHSISEIMTTYIVSATPDETIDMAARKMSRNNISGLPVVDSNNKVLGVVSAED 500
            ++++  +  + +IMT    +         A   + + +I  L VVD +N+ +G+V   D
Sbjct: 265 NLSRNLAELVVDDIMTRSPKTVKKSVLATSALATLEKFHIGALIVVDDDNRPIGLVHFHD 324

Query: 501 ISKL 504
           + ++
Sbjct: 325 LLRI 328



 Score = 24.6 bits (52), Expect = 0.006
 Identities = 8/34 (23%), Positives = 22/34 (64%)

Query: 475 MSRNNISGLPVVDSNNKVLGVVSAEDISKLIGRN 508
           +SR +   + ++D + ++ G+V+  D+++ + RN
Sbjct: 236 LSRKHFGCVGILDEDGRLCGIVTEGDMARNLSRN 269