Pairwise Alignments

Query, 132 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 689 a.a., Iron-sulfur cluster-binding protein from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 39.3 bits (90), Expect = 1e-07
 Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 1/56 (1%)

Query: 75  IQKDDEKCIDCGACVVHCPVGALSVD-EEFKILLDEDECIGCKNCAKICPVNAIKI 129
           I+ + ++C  C +CV  CP  AL  + E  ++   E  C+ C  CA  CP +AI +
Sbjct: 553 IEVNKDRCTLCLSCVSACPASALQDNTERPQLRFIEKNCVQCGLCASTCPEDAITL 608



 Score = 38.1 bits (87), Expect = 2e-07
 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 4/45 (8%)

Query: 78  DDEKCIDCGACVVHCPVGALSVDEEFKILLDEDECIGCKNCAKIC 122
           D + C  C ACV  CP GA+ +D +    +D D+C   + C K C
Sbjct: 182 DLDLCTRCNACVAACPEGAIGLDYQ----IDLDQCRDHRACVKAC 222



 Score = 38.1 bits (87), Expect = 2e-07
 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 5/58 (8%)

Query: 73  KIIQKDDEKCIDCGACVVHCPVGALSVDEEFK---ILLDEDECIGCKNCAKICPVNAI 127
           K+      + + C ACV  C   AL++  E K   I+++ + C+GC  C  +CP  A+
Sbjct: 299 KLCAHGRNETVGCNACVEIC--SALAIHSEIKRNQIVVNPNLCVGCGACTTVCPTGAL 354



 Score = 31.6 bits (70), Expect = 2e-05
 Identities = 11/17 (64%), Positives = 12/17 (70%)

Query: 82  CIDCGACVVHCPVGALS 98
           C+ CGAC   CP GALS
Sbjct: 339 CVGCGACTTVCPTGALS 355



 Score = 30.8 bits (68), Expect = 4e-05
 Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 10/62 (16%)

Query: 79  DEKCIDCGACVVHCPVGALSVDEEFKI--------LLDEDECIGCKNCAKICPVNAIKIF 130
           ++ C+ CG C   CP  A+++     +        +L+E +   C  CAK  P   +K  
Sbjct: 588 EKNCVQCGLCASTCPEDAITLQPRLLLGEQRKQLRVLNEAQPYHCIRCAK--PFGTLKGI 645

Query: 131 EI 132
           E+
Sbjct: 646 EV 647



 Score = 25.0 bits (53), Expect = 0.002
 Identities = 12/34 (35%), Positives = 14/34 (41%)

Query: 94  VGALSVDEEFKILLDEDECIGCKNCAKICPVNAI 127
           +GA  V       +D D C  C  C   CP  AI
Sbjct: 168 LGAFDVQWRTDNPIDLDLCTRCNACVAACPEGAI 201