Pairwise Alignments

Query, 132 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 395 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

 Score = 55.5 bits (132), Expect = 8e-13
 Identities = 31/83 (37%), Positives = 47/83 (56%), Gaps = 12/83 (14%)

Query: 45  ILELTGDEEQIEKSIEILKKFGEAEDIPKIIQKDDEKCIDCGACVVHCPVGALSVDEEFK 104
           I+ L G  E+ +K I I ++       P  + KD   C+ CG CV  CPV A+S+++   
Sbjct: 105 IISLPGKAEKPKKEIIIPQE-------PIAVTKD---CVACGVCVPECPVDAISIED--I 152

Query: 105 ILLDEDECIGCKNCAKICPVNAI 127
            ++D D+CI C  C++ CP NAI
Sbjct: 153 AVIDTDKCIYCTVCSQTCPWNAI 175



 Score = 44.3 bits (103), Expect = 2e-09
 Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 9/66 (13%)

Query: 73  KIIQKDDEKCIDCGACVVHCPVGALSVDEEFK---------ILLDEDECIGCKNCAKICP 123
           K+  K  E C  CG CV  CPV  +S++ E+          ++  E++C  C  CA  CP
Sbjct: 220 KLGVKLPEACPACGLCVESCPVEVISLEVEYASAKPVTDEGLVWSEEKCAYCGPCAIKCP 279

Query: 124 VNAIKI 129
             AIK+
Sbjct: 280 TGAIKV 285



 Score = 43.9 bits (102), Expect = 3e-09
 Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 9/71 (12%)

Query: 67  EAEDIPKIIQKDDEKCIDCGACVVHCPVGALSVDEEF---------KILLDEDECIGCKN 117
           +A  I  I   D +KCI C  C   CP  A+ V  +             ++E+ECIGC+ 
Sbjct: 145 DAISIEDIAVIDTDKCIYCTVCSQTCPWNAIFVAGKLPQKRQKTIKSFTVNEEECIGCEK 204

Query: 118 CAKICPVNAIK 128
           C + CP + I+
Sbjct: 205 CVEACPGSMIE 215



 Score = 42.7 bits (99), Expect = 6e-09
 Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 10/61 (16%)

Query: 79  DEKCIDCGACVVHCPVGALSVDEEFKILLDEDE----------CIGCKNCAKICPVNAIK 128
           +EKC  CG C + CP GA+ V     + L   +          CI C  CA  CP  A+K
Sbjct: 265 EEKCAYCGPCAIKCPTGAIKVVNPKGLELPSKKKTEKANEFAMCIRCGACAMKCPTGALK 324

Query: 129 I 129
           +
Sbjct: 325 M 325



 Score = 42.0 bits (97), Expect = 1e-08
 Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 8/62 (12%)

Query: 74  IIQKDDE------KCIDCGACVVHCPVGALSVDEEFKILLDEDECIGCKNCAKICPVNAI 127
           +++KD +      KC   GAC   CPVG   VD+ F     +  C+ C+ C +ICP   I
Sbjct: 49  LVEKDGKLVFNGSKCDLDGACQKACPVGIKKVDDRFP--YSKGHCVLCEKCVEICPAEII 106

Query: 128 KI 129
            +
Sbjct: 107 SL 108



 Score = 39.3 bits (90), Expect = 6e-08
 Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 1/48 (2%)

Query: 82  CIDCGACVVHCPVGALSVDEEFKILLDEDECIGCKNCAKICPVNAIKI 129
           CI C +C   CP GAL V+++ K++ +  +C     C K CPV   K+
Sbjct: 34  CIQCFSCATACPTGAL-VEKDGKLVFNGSKCDLDGACQKACPVGIKKV 80



 Score = 36.6 bits (83), Expect = 4e-07
 Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 7/53 (13%)

Query: 75  IQKDDEKCIDCGACVVHCPVGALSVDEEFKILLDEDECIGCKNCAKICPVNAI 127
           I   ++ C+ C AC   CP  A+ +   FK       CI C +CA  CP  A+
Sbjct: 4   ISIQEDACLVCNACAKACPTEAIEI-APFK------TCIQCFSCATACPTGAL 49



 Score = 36.6 bits (83), Expect = 4e-07
 Identities = 16/52 (30%), Positives = 25/52 (48%)

Query: 78  DDEKCIDCGACVVHCPVGALSVDEEFKILLDEDECIGCKNCAKICPVNAIKI 129
           ++E+CI C  CV  CP   +  + E   +   + C  C  C + CPV  I +
Sbjct: 195 NEEECIGCEKCVEACPGSMIEYNGEKLGVKLPEACPACGLCVESCPVEVISL 246



 Score = 33.9 bits (76), Expect = 3e-06
 Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 11/62 (17%)

Query: 82  CIDCGACVVHCPVGALSVDEEFK-----ILLDED------ECIGCKNCAKICPVNAIKIF 130
           C+ C  CV  CP   +S+  + +     I++ ++      +C+ C  C   CPV+AI I 
Sbjct: 91  CVLCEKCVEICPAEIISLPGKAEKPKKEIIIPQEPIAVTKDCVACGVCVPECPVDAISIE 150

Query: 131 EI 132
           +I
Sbjct: 151 DI 152



 Score = 33.5 bits (75), Expect = 3e-06
 Identities = 13/25 (52%), Positives = 16/25 (64%)

Query: 105 ILLDEDECIGCKNCAKICPVNAIKI 129
           I + ED C+ C  CAK CP  AI+I
Sbjct: 4   ISIQEDACLVCNACAKACPTEAIEI 28



 Score = 30.8 bits (68), Expect = 2e-05
 Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%)

Query: 82  CIDCGACVVHCPVGALSVDEEFKILLDEDECIGCKNCAKIC 122
           C +CG CV  CP   L +  + K+ L +  C+ C  C + C
Sbjct: 345 CNECGECVDVCPQKTLELTGDDKMPL-KGYCVMCLKCIEAC 384