Pairwise Alignments

Query, 132 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 481 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

 Score = 50.1 bits (118), Expect = 4e-11
 Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 1/52 (1%)

Query: 79  DEKCIDCGACVVHCPVGALSVDEEFKIL-LDEDECIGCKNCAKICPVNAIKI 129
           D  C+ C  C+  CP  A+S+ E  K   +D++ECI C  C+ +CP +AI +
Sbjct: 318 DGGCVLCELCIKECPEDAISIKERSKFTSIDKEECIACGTCSMVCPNDAITV 369



 Score = 48.5 bits (114), Expect = 1e-10
 Identities = 21/59 (35%), Positives = 29/59 (49%)

Query: 73  KIIQKDDEKCIDCGACVVHCPVGALSVDEEFKILLDEDECIGCKNCAKICPVNAIKIFE 131
           K+I      CI CG C   CP GA+  +E     ++   C GC  C  +CP++ I I E
Sbjct: 36  KMIDGKAFSCITCGTCAKECPTGAIKKNEYGGYYVNRKLCTGCGICKNVCPIDIIDIRE 94



 Score = 47.0 bits (110), Expect = 4e-10
 Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 5/56 (8%)

Query: 75  IQKDDEKCIDCGACVVHCPVGALSVDEEFKILLDEDECIGCKNCAKICPVNAIKIF 130
           I+ D++ C+ CG C + CP  A+   E     ++ ++C  C  C  ICP  AI+I+
Sbjct: 423 IRTDNDYCVKCGLCTIICPNDAIDKGE-----INTEKCEYCSACVNICPTRAIRIY 473



 Score = 46.6 bits (109), Expect = 5e-10
 Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 1/67 (1%)

Query: 57  KSIEILKKFGEAEDIPKIIQKDDEKCIDCGACVVHCPVGALSVDEEFKILLDEDECIGCK 116
           K +  + +F   +    +  K ++ CI+CG CV  CP  AL   E  KIL D   C  C 
Sbjct: 241 KDVLEISEFKVVKTKEDVKAKPEKHCINCGLCVDKCPSNALRF-ENGKILYDPKTCTLCN 299

Query: 117 NCAKICP 123
            C K CP
Sbjct: 300 TCVKECP 306



 Score = 43.9 bits (102), Expect = 3e-09
 Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 22/103 (21%)

Query: 46  LELTGDEEQIEKSIEILKKFGEAEDIP-----KIIQK-----------DDEKCIDCGACV 89
           L+ T ++  +E+   I K  G+  + P     KI++            D +KC++CG C+
Sbjct: 129 LKNTKNKMLMERYSTIFKMMGKTYEFPEPKHVKIVKPAERKLRHSISIDSKKCVECGKCI 188

Query: 90  VHCPVGALSVDEEFKILLDEDECIGCKNCAKICPVNAIKIFEI 132
             CP   + ++ E       D C  C  C ++CPV+AI+  ++
Sbjct: 189 YLCPKDTI-IEAEM-----VDGCTRCNICNEVCPVDAIEYGQV 225



 Score = 42.0 bits (97), Expect = 1e-08
 Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 9/57 (15%)

Query: 80  EKCIDCGACVVHCPVGALSVDEEFKILLDEDE--------CIGCKNCAKICPVNAIK 128
           E CI CG C+  CP   L +  EFK++  +++        CI C  C   CP NA++
Sbjct: 227 ENCILCGNCISKCPKDVLEI-SEFKVVKTKEDVKAKPEKHCINCGLCVDKCPSNALR 282



 Score = 40.0 bits (92), Expect = 4e-08
 Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 9/65 (13%)

Query: 73  KIIQKDDEKCIDCGACVVHCPVGALSV---------DEEFKILLDEDECIGCKNCAKICP 123
           K    D E+CI CG C + CP  A++V         ++    ++  D C+ C+ CA  CP
Sbjct: 343 KFTSIDKEECIACGTCSMVCPNDAITVVIDSLNFSGNKVHSKVIFNDNCVICEKCAIHCP 402

Query: 124 VNAIK 128
            + I+
Sbjct: 403 RDVIE 407



 Score = 40.0 bits (92), Expect = 4e-08
 Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 9/63 (14%)

Query: 79  DEKCIDCGACVVHCPVGALS--------VDEEFK-ILLDEDECIGCKNCAKICPVNAIKI 129
           ++ C+ C  C +HCP   +         VD E   I  D D C+ C  C  ICP +AI  
Sbjct: 388 NDNCVICEKCAIHCPRDVIENTSGHKKVVDRENSYIRTDNDYCVKCGLCTIICPNDAIDK 447

Query: 130 FEI 132
            EI
Sbjct: 448 GEI 450



 Score = 30.8 bits (68), Expect = 3e-05
 Identities = 15/51 (29%), Positives = 21/51 (41%), Gaps = 1/51 (1%)

Query: 82  CIDCGACVVHCPVGALSVDEEFK-ILLDEDECIGCKNCAKICPVNAIKIFE 131
           C  CG C   CP+  + + E+          C+ C  C   CP NA   F+
Sbjct: 75  CTGCGICKNVCPIDIIDIREDSTGKSYPTGMCVMCGLCTTECPYNARLYFD 125



 Score = 30.0 bits (66), Expect = 4e-05
 Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 5/27 (18%)

Query: 110 DECIGCKN-----CAKICPVNAIKIFE 131
           +EC  CKN     C ++CP NAIK+ +
Sbjct: 13  EECEDCKNKEISKCMEVCPTNAIKMID 39