Pairwise Alignments

Query, 132 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 393 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

 Score = 57.0 bits (136), Expect = 3e-13
 Identities = 28/61 (45%), Positives = 37/61 (60%), Gaps = 3/61 (4%)

Query: 70  DIPKIIQK--DDEKCIDCGACVVHCPVGALSVDEEFKILLDEDECIGCKNCAKICPV-NA 126
           ++PKII    D+E C+ CG C   CPV A+S +      +D + C+ CKNC K CPV NA
Sbjct: 114 NVPKIINLLIDEEVCVSCGTCENACPVDAISHNNTGLYEIDVNLCVSCKNCLKACPVENA 173

Query: 127 I 127
           I
Sbjct: 174 I 174



 Score = 51.6 bits (122), Expect = 1e-11
 Identities = 24/55 (43%), Positives = 32/55 (58%), Gaps = 5/55 (9%)

Query: 80  EKCIDCGACVVHCPVGALSVD--EEFK---ILLDEDECIGCKNCAKICPVNAIKI 129
           EKCI C AC   CP  A+S++  EEFK    + D   CI C NC + CP N +++
Sbjct: 47  EKCISCSACKESCPSDAISMEFNEEFKKEMPVFDAGSCINCGNCVESCPTNVLEM 101



 Score = 47.0 bits (110), Expect = 3e-10
 Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 14/64 (21%)

Query: 78  DDEKCIDCGACVVHCPVGAL--------------SVDEEFKILLDEDECIGCKNCAKICP 123
           D   CI+CG CV  CP   L              +V +   +L+DE+ C+ C  C   CP
Sbjct: 80  DAGSCINCGNCVESCPTNVLEMGTLRKEAKELLWNVPKIINLLIDEEVCVSCGTCENACP 139

Query: 124 VNAI 127
           V+AI
Sbjct: 140 VDAI 143



 Score = 38.9 bits (89), Expect = 8e-08
 Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 9/70 (12%)

Query: 60  EILKKFGEAEDIPKIIQKDDEKCIDCGACVVHCPVGALSVDEEFKILLDEDECIGCKNCA 119
           E  +K     +IP+I+      CI CG CV  CP G++ ++      L    CI    C 
Sbjct: 202 EFKEKSDVIAEIPRIVPS---LCIGCGNCVDVCP-GSIDLER-----LKVTSCIKSGKCL 252

Query: 120 KICPVNAIKI 129
           ++CP  AI+I
Sbjct: 253 EVCPTTAIRI 262



 Score = 38.9 bits (89), Expect = 8e-08
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 2/52 (3%)

Query: 78  DDEKCIDCGACVVHCPV-GALSVDEEFKI-LLDEDECIGCKNCAKICPVNAI 127
           D+EKCI C  C   C V  A+ + +E  +  ++ + C+ C  C   CPV+AI
Sbjct: 279 DEEKCIGCRICYRSCNVPEAILISKETNLPYINPEYCVRCGLCQNACPVDAI 330



 Score = 38.5 bits (88), Expect = 1e-07
 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 8/51 (15%)

Query: 82  CIDCGACVVHCPVGALSVDEEFKI--------LLDEDECIGCKNCAKICPV 124
           CI  G C+  CP  A+ +    KI        ++DE++CIGC+ C + C V
Sbjct: 245 CIKSGKCLEVCPTTAIRIGVPEKITKRTAECYIVDEEKCIGCRICYRSCNV 295