Pairwise Alignments

Query, 132 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 357 a.a., Putative electron transport protein YccM from Escherichia coli ECRC62

 Score = 46.2 bits (108), Expect = 5e-10
 Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 3/61 (4%)

Query: 72  PKIIQKDDEKCIDCGACVVHCPVGALSVDEEFKILLDEDECIGCKNCAKICPVNAIKIFE 131
           P  I+++ E CIDCG C  +CP   + VD+   I +   EC GC  C + CPV +   F 
Sbjct: 241 PFKIRRNAESCIDCGKCAKNCP-SRIPVDK--LIQVRTVECTGCMTCVESCPVASTLTFS 297

Query: 132 I 132
           +
Sbjct: 298 L 298



 Score = 35.0 bits (79), Expect = 1e-06
 Identities = 18/40 (45%), Positives = 21/40 (52%), Gaps = 4/40 (10%)

Query: 88  CVVHCPVGAL----SVDEEFKILLDEDECIGCKNCAKICP 123
           C   CP GAL    S+   FKI  + + CI C  CAK CP
Sbjct: 223 CRYLCPYGALMGVVSLLSPFKIRRNAESCIDCGKCAKNCP 262



 Score = 26.2 bits (56), Expect = 5e-04
 Identities = 10/26 (38%), Positives = 14/26 (53%)

Query: 71  IPKIIQKDDEKCIDCGACVVHCPVGA 96
           + K+IQ    +C  C  CV  CPV +
Sbjct: 267 VDKLIQVRTVECTGCMTCVESCPVAS 292