Pairwise Alignments

Query, 311 a.a., TIGR00269 family protein from Methanococcus maripaludis S2

Subject, 310 a.a., tRNA-(cytosine32)-2-thiocytidine synthetase TtcA from Variovorax sp. SCN45

 Score = 54.3 bits (129), Expect = 4e-12
 Identities = 62/249 (24%), Positives = 111/249 (44%), Gaps = 43/249 (17%)

Query: 27  IKETKRKVRKTLGRDV---------LKNNIKVAMGLSGGKDSLVMAYLLNEYYKQIP-NS 76
           I+    K+ K L R V         ++   KV + +SGGKDS  +  +L +   + P + 
Sbjct: 22  IERETHKLEKRLCRQVGQAIVDYNMIEEGDKVMVCVSGGKDSYALLDILLKLKARAPIHF 81

Query: 77  NLIAIMVNEGIEGYRTDGIDAAVKFCEEYGIEYKIVHFKDYLGTNLDEIVKIAKEKNLTM 136
           +++A+ +++   G+  + +    K+  + G+++ I +   Y       IVK    +  T 
Sbjct: 82  DIVAVNLDQKQPGFPEEVLP---KYLSDLGVDFHIENQDTY------SIVKRVIPEGKTT 132

Query: 137 NPCSFCGVIRRKILNRVSIEEKCDFLAIGHNLDDVAQAVMMN-YIEGDVKKLAFLGKSLK 195
             C  C  +RR IL RV+ E     +A+GH+ DD+ Q   +N +  G +K +        
Sbjct: 133 --CGLCSRLRRGILYRVADELGATKVALGHHRDDMLQTFFLNMFFAGKLKSMP------- 183

Query: 196 HPKFVKR------IKPLEKIPEDEVLLLAEMLELKYHKSPCPYSCLS----FRSEVSDIT 245
            PK V        I+PL  + E + +  A+  E  +   PC   C S     R +V ++ 
Sbjct: 184 -PKLVSDDGKHIVIRPLAYVAEKDTVRWAQHRE--FPIIPCTL-CGSQENLQRKQVGEML 239

Query: 246 DNLEKNHPG 254
              +K +PG
Sbjct: 240 REWDKKYPG 248