Pairwise Alignments

Query, 311 a.a., TIGR00269 family protein from Methanococcus maripaludis S2

Subject, 274 a.a., tRNA 2-thiocytidine biosynthesis protein TtcA from Pseudomonas putida KT2440

 Score = 59.3 bits (142), Expect = 1e-13
 Identities = 65/247 (26%), Positives = 111/247 (44%), Gaps = 27/247 (10%)

Query: 31  KRKVRKTLGRDVLKNNI-----KVAMGLSGGKDSLVMAYLLNEYYKQIPNS-NLIAIMVN 84
           ++++R+  G  +   N+     KV + LSGGKDS  M  +L    K  P +  ++A+ ++
Sbjct: 12  QKRLRRLAGEAITDYNMIEDGDKVMVCLSGGKDSYTMLDVLLHLQKVAPITFEIVAVNMD 71

Query: 85  EGIEGYRTDGIDAAVKFCEEYGIEYKIVHFKDYLGTNLDEIVKIAKEKNLTMNPCSFCGV 144
           +   G+    + A +K   E G+EY IV    Y  + + E+V   K        CS C  
Sbjct: 72  QKQPGFPEHVLPAYLK---ELGVEYHIVEKDTY--SVVKELVPEGK------TTCSLCSR 120

Query: 145 IRRKILNRVSIEEKCDFLAIGHNLDDVAQAVMMN-YIEGDVKKLAFLGKSLKHPKFVKRI 203
           +RR  L   + E     +A+GH+ DD+ +   +N +  G +K +    ++      V  I
Sbjct: 121 LRRGTLYTFADEIGATKMALGHHRDDIVETFFLNMFFNGALKGMPPKLRADDGRNVV--I 178

Query: 204 KPLEKIPEDEVLLLAEMLELKYHKSPCPYSCLS----FRSEVSDITDNLEKNHPGSKYSI 259
           +PL    E ++   ++M    +   PC   C S     R  V D+    E+ HPG   SI
Sbjct: 179 RPLAYCSERDIQAYSDM--KAFPIIPCNL-CGSQENLQRQVVKDMLVEWERKHPGRTESI 235

Query: 260 VRGYERL 266
            R  + +
Sbjct: 236 FRALQNV 242