Pairwise Alignments

Query, 383 a.a., tRNA 4-thiouridine(8) synthase ThiI from Methanococcus maripaludis S2

Subject, 482 a.a., tRNA s(4)U8 sulfurtransferase from Escherichia coli BL21

 Score =  159 bits (401), Expect = 2e-43
 Identities = 118/375 (31%), Positives = 195/375 (52%), Gaps = 17/375 (4%)

Query: 3   KFIVR-YGEIGTKSRQTMHRFEKLLAKNISKLAKKHGISAEVEIIHTRLIVDVPEENFE- 60
           KFI++ + EI  KS+    RF K+L  NI  + K +  +  V      + V   +EN   
Sbjct: 2   KFIIKLFPEITIKSQSVRLRFIKILTGNIRNVLKHYDETLAVVRHWDNIEVRAKDENQRL 61

Query: 61  KMKELLKKVPGIVSFSPCYYIDPDIEQIKKISS-ELFEKEIERYENK-ENITFRVKTQRP 118
            +++ L ++PGI           ++E +      ++FEK + +Y ++ E  TF V+ +R 
Sbjct: 62  AIRDALTRIPGIHHIL-------EVEDVPFTDMHDIFEKALVQYRDQLEGKTFCVRVKR- 113

Query: 119 QKKFPLTSLEVNMEVGGPISEKY-GIKVDLKNPTISLDIEVFNEYAYVFAKRIEGIGGIP 177
           + K   +S++V   VGG +++     +V L NP +++ +EV ++   +   R EGIGG P
Sbjct: 114 RGKHDFSSIDVERYVGGGLNQHIESARVKLTNPEVTVHLEVEDDRLLLIKGRYEGIGGFP 173

Query: 178 VGTQGKVIVLLSDGIDSPVSAYMMAKRGCKLLLLHMKTSDEGLEKTQKLVD--VLSDFDP 235
           +GTQ  V+ L+S G DS VS+YM+ +RGC++            E   + V   + + F  
Sbjct: 174 IGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGAAHEIGVRQVAHYLWNRFGS 233

Query: 236 EAKFVYVDFNEELAKIKAELTEINRDKYTCLYCKKYMLKLAEKHAKWHKCDAIVNGDNMG 295
             +  +V  N E   +  E+ E   D    +  K+ M++ A K A+ +   A+V G+ +G
Sbjct: 234 SHRVRFVAINFE--PVVGEILEKIDDGQMGVILKRMMVRAASKVAERYGVQALVTGEALG 291

Query: 296 QVASQTLKNLRVISEGIDYPILRPLIGLDKVEIMDIARKIGTFDISTSKEVSCFAVPKHP 355
           QV+SQTL NLR+I    D  ILRPLI  DK  I+++AR+IGT D + +    C  + K P
Sbjct: 292 QVSSQTLTNLRLIDNVSDTLILRPLISYDKEHIINLARQIGTEDFARTMPEYCGVISKSP 351

Query: 356 ITNATPDEMEKIEEQ 370
              A   ++E  EE+
Sbjct: 352 TVKAVKSKIEAEEEK 366