Pairwise Alignments

Query, 324 a.a., tRNA 2-thiocytidine biosynthesis TtcA family protein from Methanococcus maripaludis S2

Subject, 310 a.a., tRNA-(cytosine32)-2-thiocytidine synthetase TtcA from Variovorax sp. SCN45

 Score = 53.5 bits (127), Expect = 6e-12
 Identities = 58/263 (22%), Positives = 111/263 (42%), Gaps = 32/263 (12%)

Query: 56  EEISERMGRFVSKNNIISPKDKILVGLSGGKDSLALLHLLEPYRRKYGVQIYAVTVDLNI 115
           + +  ++G+ +   N+I   DK++V +SGGKDS ALL +L   + +  +    V V+L+ 
Sbjct: 31  KRLCRQVGQAIVDYNMIEEGDKVMVCVSGGKDSYALLDILLKLKARAPIHFDIVAVNLD- 89

Query: 116 NGIRPWTESNKNVEKIAEHCKNLNIPHKIIAHDGNVVEMSKILSENTKGIEYSPCFSCSM 175
                  +     E + ++  +L +   I   D   + + +++ E       + C  CS 
Sbjct: 90  -----QKQPGFPEEVLPKYLSDLGVDFHIENQDTYSI-VKRVIPEGK-----TTCGLCSR 138

Query: 176 VRRHVLTNYAKNNFESDSNVKIAIGHTLEDNSDTIMANIFKGNIIKALEPIKNFNETDVD 235
           +RR +L   A    +     K+A+GH  +D   T   N+F    +K++ P         D
Sbjct: 139 LRRGILYRVA----DELGATKVALGHHRDDMLQTFFLNMFFAGKLKSMPP----KLVSDD 190

Query: 236 FKDFKLNLKSCCMIRPMLNVSEEKIVKALVECDIEYYHDKDECPYSRHNGNGIRKKSHEV 295
            K          +IRP+  V+E+  V+     +         C       N  RK+  E+
Sbjct: 191 GKHI--------VIRPLAYVAEKDTVRWAQHREFPII----PCTLCGSQENLQRKQVGEM 238

Query: 296 LESIEEDVPNIREMVISSILNSI 318
           L   ++  P   E + +++ N +
Sbjct: 239 LREWDKKYPGRVENMFTALQNVV 261