Pairwise Alignments

Query, 324 a.a., tRNA 2-thiocytidine biosynthesis TtcA family protein from Methanococcus maripaludis S2

Subject, 274 a.a., tRNA-cytidine(32) 2-sulfurtransferase from Pseudomonas sp. DMC3

 Score = 57.0 bits (136), Expect = 5e-13
 Identities = 64/277 (23%), Positives = 118/277 (42%), Gaps = 42/277 (15%)

Query: 47  IPVVYSRVFEEISERMGRFVSKNNIISPKDKILVGLSGGKDSLALLHLLEPYRRKYGVQI 106
           + V  +++ + +    G  V+  N+I   DK++V LSGGKDS  +L +L   ++   ++ 
Sbjct: 4   LTVNQNKLQKRLRRLAGEAVADFNMIEDGDKVMVCLSGGKDSYTMLDVLMHLQKVAPIKF 63

Query: 107 YAVTVDLNINGIRPWTESNKNVEKIAEHCKNLNIPHKIIAHDGNVVEMSKILSENTKGIE 166
             V V  N++  +P    +     +  + K L I + I+  D   V + +++ E      
Sbjct: 64  DIVAV--NMDQKQPGFPEH----VLPAYLKELGIEYHIVEKDTYSV-VKELVPEGK---- 112

Query: 167 YSPCFSCSMVRRHVLTNYAKNNFESDSNVKIAIGHTLEDNSDTIMANIFKGNIIKALEPI 226
            + C  CS +RR  L  +A    +     K+A+GH  +D  +T   N+F    +KA+ P 
Sbjct: 113 -TTCSLCSRLRRGTLYTFA----DEIGATKMALGHHRDDIVETFFLNMFFNGTLKAMPP- 166

Query: 227 KNFNETDVDFKDFKLNLKSCCMIRPMLNVSEEKIVKALVECDIEYYHDKDECPYSRHN-- 284
                        + +     +IRP+   +E+         DI+ Y D  + P    N  
Sbjct: 167 -----------KLRADDGRNVVIRPLAYCNEK---------DIQAYSDLKQFPIIPCNLC 206

Query: 285 ---GNGIRKKSHEVLESIEEDVPNIREMVISSILNSI 318
               N  R+   E+L+  +   P   E +  S+ N +
Sbjct: 207 GSQENLQRQVVKEMLQDWDRKTPGRTESIFRSLQNVV 243