Pairwise Alignments

Query, 324 a.a., tRNA 2-thiocytidine biosynthesis TtcA family protein from Methanococcus maripaludis S2

Subject, 311 a.a., TIGR00269 family protein from Methanococcus maripaludis S2

 Score = 87.4 bits (215), Expect = 4e-22
 Identities = 70/272 (25%), Positives = 130/272 (47%), Gaps = 43/272 (15%)

Query: 57  EISERMGRFVSKNNIISPKDKILVGLSGGKDSLALLHLL-EPYRRKYGVQIYAVTVDLNI 115
           ++ + +GR V KNNI     K+ +GLSGGKDSL + +LL E Y++     + A+ V+  I
Sbjct: 33  KVRKTLGRDVLKNNI-----KVAMGLSGGKDSLVMAYLLNEYYKQIPNSNLIAIMVNEGI 87

Query: 116 NGIRPWTESNKNVEKIAEHCKNLNIPHKIIAHDG----NVVEMSKILSENTKGIEYSPCF 171
            G R        ++   + C+   I +KI+        N+ E+ KI  E  K +  +PC 
Sbjct: 88  EGYR-----TDGIDAAVKFCEEYGIEYKIVHFKDYLGTNLDEIVKIAKE--KNLTMNPCS 140

Query: 172 SCSMVRRHVLTNYA---KNNFESDSNVKIAIGHTLEDNSDTIMANIFKGNIIKALEPIKN 228
            C ++RR +L   +   K +F       +AIGH L+D +  +M N  +G++ K     K+
Sbjct: 141 FCGVIRRKILNRVSIEEKCDF-------LAIGHNLDDVAQAVMMNYIEGDVKKLAFLGKS 193

Query: 229 FNETDVDFKDFKLNLKSCCMIRPMLNVSEEKIVKALVECDIEYYHDKDECPYSRHNGNGI 288
                          K    I+P+  + E++++      +++Y+  K  CPYS  +    
Sbjct: 194 LKHP-----------KFVKRIKPLEKIPEDEVLLLAEMLELKYH--KSPCPYSCLS---F 237

Query: 289 RKKSHEVLESIEEDVPNIREMVISSILNSIEH 320
           R +  ++ +++E++ P  +  ++      +EH
Sbjct: 238 RSEVSDITDNLEKNHPGSKYSIVRGYERLLEH 269