Pairwise Alignments

Query, 437 a.a., TIGR04014 family B12-binding domain/radical SAM domain-containing protein from Methanococcus maripaludis S2

Subject, 488 a.a., tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase from Xanthobacter sp. DMC5

 Score = 65.1 bits (157), Expect = 5e-15
 Identities = 48/187 (25%), Positives = 87/187 (46%), Gaps = 6/187 (3%)

Query: 150 AAQNVRGANVYIETHRGCLGHCTFCQVPEFFGRDIRSKPIELIIEEVNELKKNGVNRIAI 209
           AA   RG   ++    GC   CTFC VP   G ++ S+P+  I++E   L   GV  I +
Sbjct: 172 AATRSRGPAAFVTVQEGCDKFCTFCVVPYTRGAEV-SRPVTKILDEAARLLDQGVREITL 230

Query: 210 SGGTGSLYNFKNTVNKN-KFIEMIESVSNIIGRQNLSVPDMRVDYVDEEVLNAIKNYS-- 266
            G   + ++ +    K      ++E ++ + G   L         + E+++ A ++    
Sbjct: 231 IGQNVNAFHGEGPDGKVWSLARLMERLAQMKGLARLRYTTSHPRDMGEDLIAAHRDLPQL 290

Query: 267 IGWVFYGIESGSDKLLNSMKKGTNSKKNLKAIELAKDC--GVKVAGSFIVGHPKEKEVDF 324
           + ++   ++SGSD++L +M +       L  IE  +D    + ++  FIVG P E + DF
Sbjct: 291 MPYLHLPVQSGSDRILAAMNRKHGRDLFLSLIEKMRDARPDLALSSDFIVGFPGETDRDF 350

Query: 325 LMTKDFI 331
             T D +
Sbjct: 351 EDTLDLV 357