Pairwise Alignments

Query, 264 a.a., polyprenyl diphosphate synthase from Methanococcus maripaludis S2

Subject, 251 a.a., farnesyl-diphosphate synthase from Pseudomonas simiae WCS417

 Score =  175 bits (444), Expect = 7e-49
 Identities = 94/232 (40%), Positives = 136/232 (58%), Gaps = 4/232 (1%)

Query: 33  PKHVGIIMDGNRRLAKKLGENPELGHNLGASKVHEVIDWCVSLKIPTITLYAFSLENFNR 92
           P+HV IIMDGN R AKK       GH  G   V  VI+ C   K+  +TL+AFS EN+ R
Sbjct: 13  PRHVAIIMDGNNRWAKKRFMPGVAGHKAGVDAVRAVIEVCAEAKVEVLTLFAFSSENWQR 72

Query: 93  PEKEVKVLMDLFEREFIEIADHPDVHKDKIRVSVIGRREMLPEYVQKAINYAEDKTKGYS 152
           P +EV  LMDLF +     A    ++ + I + +IG R      +Q A+  AE  T G +
Sbjct: 73  PAEEVSALMDLFFKALRREAKR--LNDNNISLRIIGDRSRFHPELQTAMREAEAITAGAN 130

Query: 153 DYFVNFAIAYGGQQEIIDSVKKIAKQVKNGEIDIEDINIELISKNLYTSNLPSPNPDLII 212
            + +  A  YGGQ +I  + +++A++V+ G +  +DI  EL+   L T +LP   PDL I
Sbjct: 131 RFVLQIAANYGGQWDIAQAAQRLAREVQAGHLRPDDITPELLQTCLVTGDLPL--PDLCI 188

Query: 213 RTSGEERISNFLTWQSCYSELYFCETYWPTFRKVDLLRSIREYQKRERRYGK 264
           RT GE RISNFL WQ  Y+ELYF + +WP F+   + +++ ++  R+RR+GK
Sbjct: 189 RTGGEHRISNFLLWQLAYTELYFSDLFWPDFKHDAMRKALADFASRQRRFGK 240