Pairwise Alignments

Query, 264 a.a., polyprenyl diphosphate synthase from Methanococcus maripaludis S2

Subject, 246 a.a., Undecaprenyl diphosphate synthase (EC 2.5.1.31) from Sphingobium sp. HT1-2

 Score =  160 bits (404), Expect = 3e-44
 Identities = 91/230 (39%), Positives = 135/230 (58%), Gaps = 4/230 (1%)

Query: 34  KHVGIIMDGNRRLAKKLGENPELGHNLGASKVHEVIDWCVSLKIPTITLYAFSLENFNRP 93
           +HV IIMDGN R AKK       GH  G   V  V      + +  +TLYAFS EN+ RP
Sbjct: 19  RHVAIIMDGNGRWAKKRLLPRIAGHRAGVEAVRRVARAAQDMGLECLTLYAFSSENWKRP 78

Query: 94  EKEVKVLMDLFEREFIEIADHPDVHKDKIRVSVIGRREMLPEYVQKAINYAEDKTKGYSD 153
             EV  LM L  R FI+ +D  + H + +R+ VIG    L   + + I  A  +T   + 
Sbjct: 79  ATEVSDLMGLL-RHFIQ-SDIDEFHANGVRLRVIGNYRALEPGLVELIESAMARTAANTG 136

Query: 154 YFVNFAIAYGGQQEIIDSVKKIAKQVKNGEIDIEDINIELISKNLYTSNLPSPNPDLIIR 213
             +  A+ YG Q E++ + +++A++V +GE+  E+I IE I   LYT++LP    DL+IR
Sbjct: 137 PVIAIALNYGAQDEMVRAAQRLAQRVASGELSAENIGIEAIDAELYTADLPPL--DLLIR 194

Query: 214 TSGEERISNFLTWQSCYSELYFCETYWPTFRKVDLLRSIREYQKRERRYG 263
           TSGE+R+SNF+ WQ+ Y+ELYF +  WP F    L +++  ++ R+RR+G
Sbjct: 195 TSGEQRLSNFMLWQAAYAELYFTDMLWPDFDGRALAQALDAFRMRDRRFG 244