Pairwise Alignments

Query, 264 a.a., polyprenyl diphosphate synthase from Methanococcus maripaludis S2

Subject, 251 a.a., Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) from Pseudomonas putida KT2440

 Score =  169 bits (428), Expect = 5e-47
 Identities = 94/232 (40%), Positives = 132/232 (56%), Gaps = 4/232 (1%)

Query: 33  PKHVGIIMDGNRRLAKKLGENPELGHNLGASKVHEVIDWCVSLKIPTITLYAFSLENFNR 92
           P+HV IIMDGN R AKK       GH  G   V  VI+ C    +  +TL+AFS EN+ R
Sbjct: 13  PRHVAIIMDGNNRWAKKRLLPGVAGHKAGVDAVRAVIEVCAKSGVEVLTLFAFSSENWQR 72

Query: 93  PEKEVKVLMDLFEREFIEIADHPDVHKDKIRVSVIGRREMLPEYVQKAINYAEDKTKGYS 152
           P +EV  LM+LF       A   D  ++ I + +IG R      +Q A+  AE  T G +
Sbjct: 73  PAEEVGALMELFFSALRREAKRLD--ENNISLRIIGDRSRFHPELQAAMREAEAVTAGNN 130

Query: 153 DYFVNFAIAYGGQQEIIDSVKKIAKQVKNGEIDIEDINIELISKNLYTSNLPSPNPDLII 212
            + +  A  YGGQ +I  + +++A++V+ G +  EDI   L+   L T +LP P  DL I
Sbjct: 131 RFILQIAANYGGQWDIAQAAQRLAREVQAGHLRPEDITPGLLQTCLATGDLPLP--DLCI 188

Query: 213 RTSGEERISNFLTWQSCYSELYFCETYWPTFRKVDLLRSIREYQKRERRYGK 264
           RT GE RISNFL WQ  Y+ELYF + YWP F+   +  ++ ++  R+RR+GK
Sbjct: 189 RTGGEHRISNFLLWQLAYAELYFSDLYWPDFKHEAMRNALADFASRQRRFGK 240