Pairwise Alignments

Query, 264 a.a., polyprenyl diphosphate synthase from Methanococcus maripaludis S2

Subject, 253 a.a., undecaprenyl pyrophosphate synthase (NCBI) from Escherichia coli BW25113

 Score =  166 bits (419), Expect = 6e-46
 Identities = 87/230 (37%), Positives = 135/230 (58%), Gaps = 4/230 (1%)

Query: 34  KHVGIIMDGNRRLAKKLGENPELGHNLGASKVHEVIDWCVSLKIPTITLYAFSLENFNRP 93
           +HV IIMDGN R AKK G+    GH  GA  V   + +  +  I  +TLYAFS EN+NRP
Sbjct: 19  RHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFSSENWNRP 78

Query: 94  EKEVKVLMDLFEREFIEIADHPDVHKDKIRVSVIGRREMLPEYVQKAINYAEDKTKGYSD 153
            +EV  LM+LF   +   ++   +H+  +R+ +IG        +Q+ I  +E  T G + 
Sbjct: 79  AQEVSALMELF--VWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQERIRKSEALTAGNTG 136

Query: 154 YFVNFAIAYGGQQEIIDSVKKIAKQVKNGEIDIEDINIELISKNLYTSNLPSPNPDLIIR 213
             +N A  YGG+ +I+  V+++A++V+ G +  + I+ E++++++    L     DL+IR
Sbjct: 137 LTLNIAANYGGRWDIVQGVRQLAEKVQQGNLQPDQIDEEMLNQHVCMHELAP--VDLVIR 194

Query: 214 TSGEERISNFLTWQSCYSELYFCETYWPTFRKVDLLRSIREYQKRERRYG 263
           T GE RISNFL WQ  Y+ELYF +  WP F + D   ++  +  RERR+G
Sbjct: 195 TGGEHRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALNAFANRERRFG 244