Pairwise Alignments

Query, 264 a.a., polyprenyl diphosphate synthase from Methanococcus maripaludis S2

Subject, 247 a.a., undecaprenyl pyrophosphate synthase from Agrobacterium fabrum C58

 Score =  172 bits (437), Expect = 5e-48
 Identities = 97/231 (41%), Positives = 132/231 (57%), Gaps = 4/231 (1%)

Query: 33  PKHVGIIMDGNRRLAKKLGENPELGHNLGASKVHEVIDWCVSLKIPTITLYAFSLENFNR 92
           P+HV IIMDGN R AK+ G    +GH  G   V E +       I  +TL+AFS EN+ R
Sbjct: 10  PEHVAIIMDGNGRWAKQRGLPRVMGHRRGVEAVRETVRAAGDCGISYLTLFAFSSENWRR 69

Query: 93  PEKEVKVLMDLFEREFIEIADHPDVHKDKIRVSVIGRREMLPEYVQKAINYAEDKTKGYS 152
           PE EV  LM L  + FI   D  ++H++ +RV +IG R+ L   ++  +  AE  T G +
Sbjct: 70  PESEVSDLMGLL-KAFIR-RDLAELHRENVRVRIIGDRQGLKTDIRSLLEEAEQMTAGNT 127

Query: 153 DYFVNFAIAYGGQQEIIDSVKKIAKQVKNGEIDIEDINIELISKNLYTSNLPSPNPDLII 212
              +  A  YG + EI  +   IA+ V  G +  + I  E+IS  L TS +P  +PDLII
Sbjct: 128 KLTLVIAFNYGSRDEITRATASIARDVAEGRLSADAITPEMISSRLDTSGMP--DPDLII 185

Query: 213 RTSGEERISNFLTWQSCYSELYFCETYWPTFRKVDLLRSIREYQKRERRYG 263
           RTSGEER+SNFL WQ+ YSE  F   YWP F +     +I +Y  R+RR+G
Sbjct: 186 RTSGEERLSNFLLWQAAYSEFLFVPEYWPDFDRQRFFSAIEQYATRDRRFG 236