Pairwise Alignments
Query, 993 a.a., AAA family ATPase from Methanococcus maripaludis S2
Subject, 1212 a.a., chromosome segregation protein SMC from Pseudomonas simiae WCS417
Score = 53.5 bits (127), Expect = 8e-11
Identities = 159/848 (18%), Positives = 353/848 (41%), Gaps = 92/848 (10%)
Query: 180 KLEGELTQEPEILENLEKLKNEVSESEILK--EEILKKY-ENLEKLKLEKN------SEI 230
+L G L ++ ++ E L++L E+ S L + Y + L++L L N +E+
Sbjct: 406 QLTGLLEKQNQVAERLQRLSTELDRSAALAPLSDAWTAYRDRLQQLMLIGNRLNKGQAEL 465
Query: 231 LQME-------EKFAENNQLKENL-KDIISEIKNINLEIQNFKNSLNLVAEESKNISENE 282
Q+E E+F + + + L ++ +E + +IQ + L ++ + +
Sbjct: 466 PQLEQRATSAAEQFTQQREALDLLYQEAGAEPHAVAEQIQLLASLLQDNRKQQRAFEDLT 525
Query: 283 ENYKKYLELELKIKELNNKLIGHKSNYESYNK--LKTIEESLLKE--LGVLKESLKDNK- 337
+ +L+ + L KL + E N+ L+T E + E L V K+ L+ +
Sbjct: 526 RLWDNQQQLDQQAATLTQKLTDAQQQREQLNQAGLQTKAELSVAEQTLNVTKQLLERQRL 585
Query: 338 ---KNPDELKENLKENDEKILILDKIKEKIKELEFIEKQIYEIKIHKKTVETLFDSVKIY 394
+ +EL+E L++ D+ + + + E + + + H + E
Sbjct: 586 ARSASVEELREQLQD-DQPCPVCGSHEHPYHQPEAL---LQSLGRHDENEEAAAQKAV-- 639
Query: 395 DDSIKTFEELKTKKNSYENLLKEKFDLEKKLQNETDEKTKLISELTDFEKIEEKINLENE 454
D++K E+L + L+ ++ + ++ ++ ++ L L +N E
Sbjct: 640 -DTLK--EKLTELRGEVGGLIAQQKEYLQQQEHLATQQQALKPSLDAHPLYASLLNQETA 696
Query: 455 LKEKYEDLSEKIDKLNEIVLKKESKISEYKNSKAELEKTKDSCHVCQSKITEEKKQELLE 514
+ + L +++ +L + + + E + N + + + Q ++ ++LL
Sbjct: 697 KRSAW--LEQQLGQLTQSISQDEQRQGALLNLQQNAGRLQQQLQAAQD--ASQQARQLLV 752
Query: 515 KYNSEIQNEQLSTESLKKQLEIILNKKEKMKVKLNEIDSFKLKYGELKEKKNYSLKVEES 574
E+ ++ E L ++L N L D+ + G E +++++
Sbjct: 753 DQQRELAGDR---ERLDQELSAFAN--------LLPADTLE---GLRAEPAATFMQLDQQ 798
Query: 575 IIETTEKLNELTGKINEYSSLNDEISLIENKLKNLENDYKNCNYSSQFLTKNDESEFLTK 634
+ ++L +L + +E + D IE + + ++ + + Q + + S+ T
Sbjct: 799 V---NQRLEQLGHQRDELAEQQDRQQAIEKEQTHQQHRQQQLDALLQQVNEL-ASQQQTA 854
Query: 635 KLELSKIIGDYDSSKIENEKKSLENLKDELKNTIYNLEREINLKKELKNIQNDISSKIGI 694
+ +LS ++G++ S+ E+ ++ LE + + + E + K+L+ I N +
Sbjct: 855 QAKLSALLGEHSSA--EHWQQQLEQAVTQSRQS------ETDANKQLQEIHNALIELAAD 906
Query: 695 VECYVKWE----TEKSDFENKLSECKENYEKYMES-LAVLKNYSKTYSVEINNLNEFLNQ 749
++ + E E ++SE + + + ++ L+ L Y +++ L + L
Sbjct: 907 LKAQQEREHALQAEHHALATRISEWRALHPELDDAGLSHLLAYD---DAQVSQLRQQL-- 961
Query: 750 KIAEKQQFCEKLLETRTEIEKNIQTVNYNPELHENAKRLYENILNEFNDILRTLERISSE 809
+++EK K+L E +N L A ++ L N L E+I +E
Sbjct: 962 QLSEKAVEQAKVLLQEREQRLADHQALHNGNLEAQA---LDSALATLNQQLAEGEKICAE 1018
Query: 810 LKLKNENISYLNEKIQNLSNKKEEKKKIEEFKEYLDKIKREIFSKDG--FQKYLREKYIP 867
L+ + E Q + + K +E++ + ++ I S G F+K + +
Sbjct: 1019 LRARQSEDQRRQEANQAFA--EHIAKAYDEWQRWA-RLNALIGSATGDTFRKIAQAYNLD 1075
Query: 868 LIQRHTNQIFQEFELPYSHIQLKDDYSLIV------DGL-PVETLSGGEQIAVSLALRLG 920
L+ H N ++ Y + L+V D L V +LSGGE VSLAL LG
Sbjct: 1076 LLVHHANVQLRQLVRRYRLKRGGSMLGLLVMDTEMGDELRSVHSLSGGETFLVSLALALG 1135
Query: 921 ISKAVCN--NIECIILDEPTAYLDEDRRKNLLNIFKNIKTI-NQMAIITHHQELEQIADN 977
++ + IE + +DE LD + + ++ ++ ++A+I+H QE+ +
Sbjct: 1136 LASMASSTLKIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVAVISHVQEMHERIPV 1195
Query: 978 IVKVRKIG 985
++V++ G
Sbjct: 1196 QIQVKRQG 1203
Score = 45.1 bits (105), Expect = 3e-08
Identities = 143/834 (17%), Positives = 309/834 (37%), Gaps = 138/834 (16%)
Query: 22 SKGITSIIGQNGSGKSSIFQAMNFALF--APR-GNNFRIE--------------NLMQQG 64
S G+ +I G G+GKS++ A+ ALF PR G+ + + L+++G
Sbjct: 29 SAGLFAITGPTGAGKSTLLDALCLALFGAVPRLGDTGQAKMPDADSDISIGDPRTLLRRG 88
Query: 65 AASFSVELEF-EMMGNTYLVK--RKRFQHKTDDKL---------YVNGKLNAESASEINK 112
E++F + G Y + R + K KL + +L A +E
Sbjct: 89 TGGGYAEVDFVGVSGRRYRARWEANRARDKASGKLQNSRQSLIDLDSDQLLASQKTEYKT 148
Query: 113 KIEEILEIDNSVFSNAIYIKQGEIANLIQMTPRDRKEVIGKL--------LGIEKYEKAS 164
++E L ++ F+ A+ + Q E + ++ +R E++ KL LG ++KA
Sbjct: 149 QLELALGLNFEQFTRAVLLAQSEFSAFLKANDNERSELLEKLTDTALYTQLGRRAFDKAK 208
Query: 165 EKMNIVKKSYEET------LLKLEGELTQEPEILENLEKLKNEVSESEILKEEILKKYEN 218
E K+ ++ + EL Q+ + + K + + L+ LK+
Sbjct: 209 EAREAHKQLQDQATGVVPLAAEARAELDQQFDAAQQHLKTQQAQLKQLELQHTWLKELRE 268
Query: 219 LEKLKLEKNSEILQMEEKFAENNQLKENLKDIISEIKNINLEIQNFKNSLNLVAEESKNI 278
++ +L ++ + + ++ Q +++L + +
Sbjct: 269 WQERQLATTEQLQRAQAEWDNQGQQRDDLSRL-------------------------DQL 303
Query: 279 SENEENYKKYLELELKIKELNNKLIGHKSNYESYNKLKTIEESLLKELGVLKESLKDNKK 338
+ + + EL + L ++ H+ + +L T +E ++ + +L K
Sbjct: 304 APQRHQFARQAELSTLLAPLAAQIQLHR---QQQGELHTRQEQAQQQQASAQTALAQALK 360
Query: 339 NPDELKENLKEN-DEKILILDKIKEKIKELEFIEKQIYEIKIHKKTVETLFDSVKIYDDS 397
N + L++ +E+ + KE K +E +KQ +E +E + +
Sbjct: 361 NQADAVPLLRQAFEEQSTLAHLTKELAKRIE--DKQQHE----SACIEGQRQLTGLLEKQ 414
Query: 398 IKTFEELKTKKNSYENLLKEKFDLEKKLQNETDEKTKLISELTDFEKIEEKINL-ENELK 456
+ E L+ L + D L +D T L I ++N + EL
Sbjct: 415 NQVAERLQR--------LSTELDRSAALAPLSDAWTAYRDRLQQLMLIGNRLNKGQAELP 466
Query: 457 EKYEDLSEKIDKLNEIVLKKESKISEYKNSKAELEKTKDSCHVCQSKITEEKKQELLEKY 516
+ + + ++ + ++E+ Y+ + AE + + S + + +KQ+ +
Sbjct: 467 QLEQRATSAAEQFTQ---QREALDLLYQEAGAEPHAVAEQIQLLASLLQDNRKQQRAFED 523
Query: 517 NSEIQNEQLSTESLKKQLEIILNKKEKMKVKLNEIDSFKLKYGELKEKKNYSLKVEESII 576
+ + + Q + L L ++ + +LN+ K E S+
Sbjct: 524 LTRLWDNQQQLDQQAATLTQKLTDAQQQREQLNQ--------------AGLQTKAELSVA 569
Query: 577 ETTEKLNELTGKINEYSSLNDEISLIENKLKNLENDYKNCNYSSQFLTKNDESEFLTKKL 636
E T LN +T ++ E L S+ E L+ D + C + E L + L
Sbjct: 570 EQT--LN-VTKQLLERQRLARSASVEE--LREQLQDDQPCPVCGSHEHPYHQPEALLQSL 624
Query: 637 ELSKIIGDYDSSKIENEKKSLENLKDELKNTIYNLEREINLKKELKNIQNDISSKIGIVE 696
G +D ENE+ + + D LK + L E+ G++
Sbjct: 625 ------GRHD----ENEEAAAQKAVDTLKEKLTELRGEVG----------------GLIA 658
Query: 697 CYVKWETEKSDFENKLSECKENYEKYMESLAVLKNYSKTYSVEINNLNEFLNQKIAEKQQ 756
++ ++ + K + + + ++L + S + L Q I++ +Q
Sbjct: 659 QQKEYLQQQEHLATQQQALKPSLDAHPLYASLLNQETAKRSAWLEQQLGQLTQSISQDEQ 718
Query: 757 FCEKLLETRTEIEKNIQTVNYNPELHENAKRLYENILNEFNDILRTLERISSEL 810
LL + + Q + + + A++L ++++ ++ ER+ EL
Sbjct: 719 RQGALLNLQQNAGRLQQQLQAAQDASQQARQL---LVDQQRELAGDRERLDQEL 769