Pairwise Alignments

Query, 993 a.a., AAA family ATPase from Methanococcus maripaludis S2

Subject, 1147 a.a., Chromosome partition protein smc from Sphingobium sp. HT1-2

 Score = 52.8 bits (125), Expect = 1e-10
 Identities = 51/234 (21%), Positives = 104/234 (44%), Gaps = 22/234 (9%)

Query: 1   MIIKNIKMENFRSHRN-TSINFSKGITSIIGQNGSGKSSIFQAMNFALFAPRGNNFR--- 56
           M IK +K+  F+S  + T +    G+T I+G NG GKS++ +A+ + +      + R   
Sbjct: 1   MQIKRLKLSGFKSFVDATELRIEPGLTGIVGPNGCGKSNLLEAIRWVMGESSAKSMRGGG 60

Query: 57  IENLMQQGAASFSVELEFEMMGNTYLVKRKRFQH---KTDDKLYVNGKLNAESASEINKK 113
           +E+++  G  S       E+   T   + + F       D +L V  ++   + S     
Sbjct: 61  MEDVIFAGTTSRPQRDFAEVSLLTIQEQGELFNAVDVGADGELEVTRRIERGAGSAYRAN 120

Query: 114 IEEILEIDNS-VFSNA-------IYIKQGEIANLIQMTPRDRKEVIGKLLGIEKYEKASE 165
            +++   D + +F++A         + QG IA +I   P++R+ ++ +  GI        
Sbjct: 121 GKDVRAKDVALIFADAATGAHSPALVSQGRIAAVIAARPQERRAMLEEAAGI-------A 173

Query: 166 KMNIVKKSYEETLLKLEGELTQEPEILENLEKLKNEVSESEILKEEILKKYENL 219
            +++ +K  E+ L   EG L +  EIL +++     +       E  ++  E +
Sbjct: 174 GLHVRRKDAEQKLRAAEGNLARLDEILADMDSRAGNLRRQARAAERYIRLSEQI 227



 Score = 30.0 bits (66), Expect = 0.001
 Identities = 48/225 (21%), Positives = 96/225 (42%), Gaps = 29/225 (12%)

Query: 769  EKNIQTVNYNPELHENAKRLYENILNEFNDILRTLERISSE---LKLKNENISYLN---- 821
            E+ I+T   + E  E    +    L   +  +RT +   +E   L  + E I  +N    
Sbjct: 889  ERRIETNRLSGERFECPPPVLPEKLGFPSADIRTAQSEQAEHDRLSAERERIGPVNLVAA 948

Query: 822  EKIQNLSN-KKEEKKKIEEFKEYLDKIKREIFS--KDGFQKYLREKYIPLIQRHTNQIFQ 878
            ++++ L   +   + +  E  + +++++  I S  ++G Q+ L       +  H  ++F 
Sbjct: 949  QELEELETIQATSRAESAELTQAINQLRGSIGSLNREGRQRLLAA--FEAVDGHFRRLFT 1006

Query: 879  E-FELPYSHIQLKDDYSLIVDGLPVET------------LSGGEQIAVSLALRLGISKAV 925
              F    +H++L D    +  GL +              LSGGEQ   ++AL  G+   +
Sbjct: 1007 TLFNGGQAHLELIDSDDPLEAGLEIMAQPPGKKLAALTLLSGGEQALTAVALIFGL--FL 1064

Query: 926  CNNIECIILDEPTAYLDEDRRKNLLNIFKNI--KTINQMAIITHH 968
             N     +LDE  A LD+   +   ++   +  +T  +  I+TH+
Sbjct: 1065 TNPAPICVLDEVDAPLDDANVERFCDLLDAMVAQTRTRYLIVTHN 1109