Pairwise Alignments

Query, 993 a.a., AAA family ATPase from Methanococcus maripaludis S2

Subject, 1162 a.a., Chromosome partition protein Smc from Pseudomonas putida KT2440

 Score = 63.9 bits (154), Expect = 6e-14
 Identities = 101/540 (18%), Positives = 227/540 (42%), Gaps = 89/540 (16%)

Query: 1   MIIKNIKMENFRSHRN-TSINFSKGITSIIGQNGSGKSSIFQAMNFALFAPRGNNFRIEN 59
           M +K I++  F+S  + T++NF   + +++G NG GKS+I  A+ + +      N R E+
Sbjct: 1   MRLKCIRLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES 60

Query: 60  LM---------QQGAASFSVELEFEMMGNTYLVK---------RKRFQHKTDDKLYVNG- 100
           +          ++  +  S+EL F+    T + +         R++      +  Y+NG 
Sbjct: 61  MTDVIFNGSSGRKPVSQASIELVFDNSETTLVGEYAAYAEISIRRKVTRDGQNSYYLNGT 120

Query: 101 KLNAESASEINKKIEEILEIDNSVFSNAIYIKQGEIANLIQMTPRDRKEVIGKLLGIEKY 160
           K      ++I       L       S +I I+QG I+ LI+  P + +  I +  GI KY
Sbjct: 121 KCRRRDITDI------FLGTGLGPRSYSI-IEQGMISKLIEAKPEELRNFIEEAAGISKY 173

Query: 161 -EKASEKMNIVKKSYEETLLKLEGELTQEPEILENLEKLKNEVSESEILKEEILKKYENL 219
            E+  E  N ++++                   ENL +L +       L+EE+ ++ E L
Sbjct: 174 KERRRETENRIRRTQ------------------ENLARLTD-------LREELERQLERL 208

Query: 220 EKLKLEKNSEILQMEEKFAENNQLKENLKDIISEIKNINLEIQNFKNSLNLVAEESKNIS 279
            +          Q  EK+ E    +  LK  +S ++  +L+ +  +   +++ ++  +  
Sbjct: 209 HRQ--------AQAAEKYREYKAQERQLKARLSALRWRDLD-EQVRQRESVIGDQGVS-- 257

Query: 280 ENEENYKKYLELELKIKELNNKLIGHKSNYESYNKLKTIEESLLKELGVLKESLKDNKKN 339
            +E    +    +  I+ L +   GH    E +N+++    S+  ++  +++S++  ++ 
Sbjct: 258 -HEALVAEQRNADASIERLRD---GHHELSERFNQVQGRFYSVAGDIARVEQSIQHGQQR 313

Query: 340 PDELKENLKENDEKIL-----------ILDKIKEKIKELEFIEKQIYEIKIHKKTVETLF 388
             +L+++ KE +   L           +L  + E++  LE   +Q   +   ++    L 
Sbjct: 314 LRQLQDDFKEAERTRLETESHLGHDRTLLATLGEELAMLE--PEQEMTLAAAEEAAAALE 371

Query: 389 DS---VKIYDDSIKTFEELKTKKNSYENLLKEKF-DLEKKLQNETDEKTKLISELTDFEK 444
           ++   +  + +   +F     +      + + +   LE  L+ + + + KL+ E      
Sbjct: 372 EAELGMHGWQEQWDSFNSRSAEPRRQAEVQQARLQQLETSLERQAERQRKLVEEREQLGS 431

Query: 445 IEEKINLENELKEKYEDLSEKIDKLNEIVLKKESKISEYKNSKAELEKTKDSCHVCQSKI 504
             +    +  + E  E L+     L E+ L +E  I   ++++ +L++   +    Q  +
Sbjct: 432 DPQ----DAAMLELAEQLASSEMLLEELQLCEEQVIERLESAREQLQQATQAQQQAQGDL 487



 Score = 45.8 bits (107), Expect = 2e-08
 Identities = 106/515 (20%), Positives = 188/515 (36%), Gaps = 71/515 (13%)

Query: 501  QSKITEEKKQELLEKYNSEIQNEQLSTESLKKQLEIILNKKEKMKVKLNEIDSFKLKYGE 560
            Q ++ +E   E L++    ++ +QL  E  ++QL      + ++  +L    S      E
Sbjct: 661  QEQLEQEAALEQLDQQLQALREQQLDLEEQREQLRRRTQDENRLHGELKASLSASRARAE 720

Query: 561  LKEKKNYSLKVEESIIETTEKLNELTGKINEYSSLNDEISLIENKLKNLENDYKNCNYSS 620
              E +   L+ E S +E    L        E+  L +   L++  L+ +  D +      
Sbjct: 721  QVELRRRRLQEELSELEEQRAL--------EHEQLGEARLLLQEALELMAQDTEQ---RE 769

Query: 621  QFLTKNDESEFLTKKLELSKIIGDYDSSKIENEKKSLENLKDELKNTIYNLEREINLKKE 680
            Q + + D    L + L+  +                L +L+ +  +T   LER       
Sbjct: 770  QLMARRDT---LRESLDRVRQEARQHKDHAHQLAVRLGSLRAQHDSTRQALERLEQQAAR 826

Query: 681  LKNIQNDISSKIGIVECYVKWETEKSDFENKLSECKENYEKYMESLAVLKNYSKTYSVEI 740
            L   Q  +S  +       + E  + +   KL E  E      E + + + +      E+
Sbjct: 827  LTERQEQLSLNLE------EGEAPQEELRLKLEELLERRMSVDEEMRLARLHMDEADREL 880

Query: 741  NNLNEFLNQKIAEKQQFCEKLLETRTEIEKNIQTVNYNPELHENAKRLYENILNEFND-- 798
             +  +   Q   + Q    +L + R E +           L    K L E +L +  D  
Sbjct: 881  RDAEKRRTQAEQQAQLLRGQLEQLRLECQG----------LDVRRKTLQEQLLADGYDLQ 930

Query: 799  -ILRTLERISSELKLKNENISYLNEKIQNLSNKK----EEKKKIEEFKEYLDKIKREIFS 853
             +L TLE  +SE   + E +  L  +IQ L        EE ++  E K YLD    ++  
Sbjct: 931  GVLATLEAEASEQGTEQE-LEQLEARIQRLGAINLAAIEEYEQQSERKRYLDAQDADLVE 989

Query: 854  KDGFQKYLREKYIPLIQRHTNQIFQE----------------FELPYSHIQLKD----DY 893
                     E  I  I + T   F++                F    ++++L      D 
Sbjct: 990  A----LETLENVIRKIDKETRNRFKDTFDQINAGLQALFPKVFGGGSAYLELTGEDLLDT 1045

Query: 894  SLIVDGLP-------VETLSGGEQIAVSLALRLGISKAVCNNIECIILDEPTAYLDEDRR 946
             + +   P       +  LSGGE+   +LAL   I K   N     +LDE  A LD+   
Sbjct: 1046 GVTIMARPPGKKNSTIHLLSGGEKALTALALVFAIFKL--NPAPFCMLDEVDAPLDDANV 1103

Query: 947  KNLLNIFKNIKTINQMAIITHHQELEQIADNIVKV 981
                 + K +    Q   ITH++   ++AD ++ V
Sbjct: 1104 GRYARLVKEMSESVQFIYITHNKIAMEMADQLMGV 1138