Pairwise Alignments
Query, 993 a.a., AAA family ATPase from Methanococcus maripaludis S2
Subject, 1214 a.a., Exonuclease SbcC from Pseudomonas putida KT2440
Score = 63.9 bits (154), Expect = 6e-14
Identities = 158/920 (17%), Positives = 366/920 (39%), Gaps = 137/920 (14%)
Query: 22 SKGITSIIGQNGSGKSSIFQAMNFALF--APRGNNFRIE----------------NLMQQ 63
S G+ +I G G+GKS++ A+ ALF PR N E NL+++
Sbjct: 29 SAGLFAITGPTGAGKSTLLDALCLALFGTVPRLNAIGREAKVPDADGDIPTSDPRNLLRR 88
Query: 64 GAASFSVELEF-EMMGNTYLVKRKRFQ-HKTDDKLYVNGKLN---------------AES 106
G S E++F + G Y R R++ ++ DK NGKL
Sbjct: 89 GTGSGFAEVDFVGIDGRRY---RARWEANRARDK--ANGKLQHSRQSFYDLDSEQVLGSG 143
Query: 107 ASEINKKIEEILEIDNSVFSNAIYIKQGEIANLIQMTPRDRKEVIGKL--------LGIE 158
+E + +E L ++ F+ A+ + Q E ++ +DR E++ KL LG
Sbjct: 144 KNEYKQLVEARLGLNFEQFTRAVMLAQSEFGAFLKADDKDRSELLEKLTNTAIYTRLGQR 203
Query: 159 KYEKASE--KMNIVKKSYEETLLKLEGELTQEPEILENLEKLKNEVSESEILKEEILKKY 216
+ KA E + + K LL + E E+ + LE+ + + + + ++ ++
Sbjct: 204 AFSKAREAGEAHNALKERASHLLPMAAE--ARAELDQRLEQAQQQFKADQAGERQLEQQR 261
Query: 217 ENL---EKLKLEKNSEILQMEEKFAENNQLKENLKDIISEIKNINLEIQNFKNSLNLVAE 273
L +L+ + ++ + QL E D ++ ++ + + F L A+
Sbjct: 262 NWLNEQRQLQAQHTEASTTLQAAELDWQQLAEPRLD-LARLERLAPQRHQFHRRQALSAQ 320
Query: 274 ESKNISENEENYKKYLELELKIKELNNKL-----------IGHKSN-------YESYNKL 315
+ ++ E ++ EL+++ +EL L H N + + + L
Sbjct: 321 LAPVAAKIAEQQQQQAELQVRTRELEQALDTARQALADRQAEHGENAPRLRQAFAAQDTL 380
Query: 316 KTIEESLLKELGV---LKESLKDNKKNPDELKENLKENDEKILILDKIKEKIKELEFIEK 372
+++ L + + ++ + D ++ +L++N + + +++ ++D + L +
Sbjct: 381 ARLDQELAAQRSISQQAQQQVADGQQQLQQLEDNQQRSVQQLALIDTALADSQHLAGLAN 440
Query: 373 QIYEIKIHKKTVETLFDSVKIYDDSIKTFEELKTKKNSYENLLKEKFDL---EKKLQNE- 428
+ K V + + + + + ++ N+ ++ +DL E K + +
Sbjct: 441 AWHAYLPQLKQVMLIGGRLTKGREELPGLQAQASQANARLQAERDAYDLLFREAKAEPQA 500
Query: 429 -TDEKTKLISELTDFEKIEEKINLENELKEKYEDLSEKIDKLNE----IVLKKESKISEY 483
++ L L D K + + + L + ++L +++D L E +L+++ I+E
Sbjct: 501 LAEQIDLLGGMLQDNRKQQRAVEEMSRLHGREQELRQQLDALRERQQQAMLQRQQLITEG 560
Query: 484 KNSKAELEKTK-------------------------------DSCHVCQSKITEEKKQEL 512
+KAELE + + C VC S + E
Sbjct: 561 TAAKAELEAAEQALTLTRQLLERQRLARNTSVEELRNQLRDGEPCPVCGSAEHPFHQPEA 620
Query: 513 LEKYNSEIQNEQLSTESLKKQLEIILNKKEKMKVKLNEIDSFKLKYGELKEKKNYSLKVE 572
L S +++Q + +KQ+E + +K +++ +L +++ + + +++ L+
Sbjct: 621 L--LQSLGRHDQAEEHAAQKQVETLNSKLVELRTQLGVVNAQLKDFQQQQQRLGEQLQPL 678
Query: 573 ESIIETTEKLNELTGKINEYSSLNDEISLIENKLKNLENDY-KNCNYSSQFLTKNDESEF 631
+ ++ L + ++ S + ++++L+ L+ + ++ S L ++
Sbjct: 679 VAQVQAHSLWPALAPQDDKARS-----AWLDSQLRRLDEEISQDEKRQSALLALQRDAAR 733
Query: 632 LTKKLELSKIIGDYDSSKIENEKKSLENLKDELKNTIYNLEREINLKKELKNIQNDISSK 691
L ++L+ + +E + ++L N + L+ + +L + ++ LK + +D ++
Sbjct: 734 LNQQLQAAHDAQQQAQRHLEQQHQALANDEQLLQQGLNDLAGVLP-EEALKALNDDPAN- 791
Query: 692 IGIVECYVKWETEKSDFENKLSECKENYEKYMESLAVLKNYSKTYSVEINNLNEFLNQKI 751
++ + + + +L + K+ E+ L + + L QK+
Sbjct: 792 -----AFLALDQQIAQRLQQLEQRKDELEEQQARQTQLDKLRDQQQARVQGQQQ-LQQKL 845
Query: 752 A----EKQQFCEKLLETRTEIEKNIQTVNYNPELHENAKRLYENILNEFNDILRTLERIS 807
A ++QQ L E E + E+A+ L + D+ +++
Sbjct: 846 AALDEQRQQALASLAELLGEHASAEAWQQHMDTALEHARTLDADTAQRLQDLRTQGVQLA 905
Query: 808 SELKLKNENISYLNEKIQNL 827
SELK + L+ + Q L
Sbjct: 906 SELKANTQQQQALDAECQQL 925
Score = 45.8 bits (107), Expect = 2e-08
Identities = 103/559 (18%), Positives = 228/559 (40%), Gaps = 81/559 (14%)
Query: 451 LENELKEKYEDLSEKIDKLNEIVLKKESKISEYKNSKAELEKTKDSCHVCQSKITEEKKQ 510
L+++L+ E++S+ K++S + + A L + + H Q ++ ++
Sbjct: 703 LDSQLRRLDEEISQDE--------KRQSALLALQRDAARLNQQLQAAHDAQ----QQAQR 750
Query: 511 ELLEKYNSEIQNEQLSTESLKKQLEIILNKKEKMKVKLNEIDSFKLKYGELKEKKNYSLK 570
L +++ + +EQL + L ++ +E +K LN+ + N L
Sbjct: 751 HLEQQHQALANDEQLLQQGLNDLAGVL--PEEALKA-LND------------DPANAFLA 795
Query: 571 VEESIIETTEKLNELTGKINEYSSLNDEISLIENKLKNLENDYKNCNYSSQFLTKNDESE 630
+++ I + ++L + ++ E + ++ + ++ + + L + +
Sbjct: 796 LDQQIAQRLQQLEQRKDELEEQQARQTQLDKLRDQQQARVQGQQQLQQKLAALDEQRQQA 855
Query: 631 FLTKKLELSKIIGDYDSSKI--ENEKKSLENLKDELKNTIYNLE----REINLKKELKNI 684
+ L++++G++ S++ ++ +LE+ + +T L+ + + L ELK
Sbjct: 856 LAS----LAELLGEHASAEAWQQHMDTALEHARTLDADTAQRLQDLRTQGVQLASELK-- 909
Query: 685 QNDISSKIGIVECY------VKWETEKSDFENKLSECKENYEKYMESLAVLKNYSKTYSV 738
N + EC +W +E + ++ A L
Sbjct: 910 ANTQQQQALDAECQQLQAQIAQWRSEHPELDD----------------AGLDRLLAMDDA 953
Query: 739 EINNLNEFLN--QKIAEKQQFCEKLLETRTEIEKNIQTVNYNPELHENAKRLYENILNEF 796
++N L + L +K E+ + + E R + TV+ + E A L E
Sbjct: 954 QVNELRQRLQGAEKAIEQGRVLLQEREQRLQHHAAQMTVDTTVQALEQA-------LAEL 1006
Query: 797 NDILRTLERISSELKLKNENISYLNEKIQNLSNKKEEKKKIEEFKEYLDKIKREIFSKDG 856
+ L E+ +EL+ + + + Q L+ + E+ + + L+ + S D
Sbjct: 1007 RERLANHEQQCAELRAQQADDQRRQQAHQALAAEIEQAHQQWQRWARLNALIGSA-SGDV 1065
Query: 857 FQKYLREKYIPLIQRHTNQIFQEFELPYSHIQLKDDYSLIV------DGL-PVETLSGGE 909
F+K + + L+ H N ++ Y + L+V D L V +LSGGE
Sbjct: 1066 FRKIAQGYNLDLLLHHANAQLRQLARRYRLKRGGSALGLLVLDTEMGDELRSVHSLSGGE 1125
Query: 910 QIAVSLALRLGISKAVCN--NIECIILDEPTAYLDEDRRKNLLNIFKNIKTI-NQMAIIT 966
VSLAL LG++ + IE + +DE LD + + ++ ++ ++A+I+
Sbjct: 1126 TFLVSLALALGLASMASSTLRIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVAVIS 1185
Query: 967 HHQELEQIADNIVKVRKIG 985
H QE+ + ++VR+ G
Sbjct: 1186 HVQEMHERIPVQIQVRRQG 1204