Pairwise Alignments

Query, 264 a.a., RlmF-related methyltransferase from Methanococcus maripaludis S2

Subject, 316 a.a., Modification methylase, HemK family from Pseudomonas putida KT2440

 Score = 42.7 bits (99), Expect = 9e-09
 Identities = 56/221 (25%), Positives = 94/221 (42%), Gaps = 32/221 (14%)

Query: 5   PLELGLKIEDAILVNEKLKDFVVYKSGKPRIDFKNKEAMKEYNIAILGHVFGLDMDFHED 64
           P E GL   D +L+ E+ +   +   G+  I      ++ E+   +L   F  D     D
Sbjct: 59  PFEPGLLSADQLLLLERAQ--ALGAQGERLISTVRWSSLDEF--LLLHSAFPTDA---RD 111

Query: 65  ALIPTPINRYLFIKNIFDEKDD----IKDVLEIGTGSGIISILIAKYFE-CNVTATDTVS 119
           A+   P + Y F + I +        ++  ++IG GSG+ ++LIA+  +   V+A D   
Sbjct: 112 AVFFGP-DSYRFAQVIHEHLQHCPARVEHAVDIGCGSGVGALLIARAAQHAQVSAVDINP 170

Query: 120 DYLKIAKDNISKNNLTSKINLIDSKGKIIFDIPELKNKKFDLIISYPPYYADNSVASKRS 179
             L+    N +   L    NL      ++  I    +  FDLI++ PPY  D +    R 
Sbjct: 171 LALRYTAINAA---LAGVSNLSVEPSDLLDGI----SGTFDLIVANPPYMLDPNARIYRH 223

Query: 180 FGGAFASEVELIGGGAYGEVFSQKIIEEGMDHLNNGGIVAI 220
                       GGGA G   S +I+E+  D L+  G + +
Sbjct: 224 ------------GGGALGVDLSLRIVEQARDRLSRHGTLLL 252