Pairwise Alignments

Query, 264 a.a., RlmF-related methyltransferase from Methanococcus maripaludis S2

Subject, 308 a.a., 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF from Escherichia coli ECRC62

 Score = 48.9 bits (115), Expect = 1e-10
 Identities = 48/172 (27%), Positives = 83/172 (48%), Gaps = 13/172 (7%)

Query: 18  VNEKLKDFVVYK-SGKPRIDFKNKEAMKEYNIAILGHVFGL-DMDFHEDALIPTPINRYL 75
           VN +L+ F+    +G+  +DF N  A+K  N A+L H + + + D  +  L P    R  
Sbjct: 26  VNPELRQFLTLTPAGEQSVDFANPLAVKALNKALLAHFYAVANWDIPDGFLCPPVPGRAD 85

Query: 76  FIKNIFDEKDDIK-------DVLEIGTGSGIISILIAKY-FECNVTATDTVSDYLKIAKD 127
           +I ++ D   +          +L+IG G+  I  LI  + +    T ++T S  L  A+ 
Sbjct: 86  YIHHLADLLAEASGTIPANASILDIGVGANCIYPLIGVHEYGWRFTGSETSSQALSSAQA 145

Query: 128 NISKN-NLTSKINLIDSK-GKIIFDIPELKNKKFDLIISYPPYYADNSVASK 177
            IS N  L   I L   K    IF+    KN+++D  +  PP++ D++ A++
Sbjct: 146 IISSNPGLNRAIRLRRQKESGAIFNGIIHKNEQYDATLCNPPFH-DSAAAAR 196