Pairwise Alignments

Query, 468 a.a., selenocysteine-specific translation elongation factor from Methanococcus maripaludis S2

Subject, 640 a.a., selenocysteyl-tRNA-specific translation elongation factor from Pseudomonas putida KT2440

 Score =  124 bits (312), Expect = 7e-33
 Identities = 86/261 (32%), Positives = 135/261 (51%), Gaps = 11/261 (4%)

Query: 8   LGIFGHIDHGKTTLSKVLTEIASTSAHDKLPESQKRGITIDIGFSAFKL-ENYRIT-LVD 65
           +G  GHIDHGKT L   LT      A D+  E + RG+TID+G+    L E   +T  +D
Sbjct: 3   VGTAGHIDHGKTALLLALTG----QAGDQRQEERARGMTIDLGYRYAALSEGAPLTGFID 58

Query: 66  APGHADLIRAVVSAADIIDLALIVVDAKEGPKTQTGEHMLILDHFNIP-IIVVITKSDNA 124
            PGH   I  +++ A  IDL L+VV A +G   QT EH+ I++   IP  +V I+K D  
Sbjct: 59  VPGHERFIHNMLAGAHGIDLVLLVVAADDGVMPQTREHLAIIELLGIPQALVAISKCDRV 118

Query: 125 GTEEIKRTEMIMKSILQSTQNLKNSSIIPISAKTGFGVEELKNLIINTLNNAEIIRNTES 184
               +   +M +  +L +      +   P+S+ +G GV+ L+  ++         R+   
Sbjct: 119 EPSRLAEVQMQVSELL-APGPYAGARQFPLSSISGEGVDALRQALLEAEAGTRQ-RSVVG 176

Query: 185 YFKMPLDHAFPIKGAGTVVTGTINKGIVKVGDELKVLPINMSTKVRSIQCFKESVMEAKA 244
            F++ +D AF + GAG VVTGT   G V  GD L +       +VR +    ++ + A+A
Sbjct: 177 GFRLAVDRAFAVTGAGVVVTGTALAGRVSAGDTLLLGKAGKVVRVRGLHAQNQAALVAEA 236

Query: 245 GDRVGM--AIQGVESKQIYRG 263
           G RV +  A + +  +Q++RG
Sbjct: 237 GQRVALNIAAERLAVEQVHRG 257