Pairwise Alignments

Query, 468 a.a., selenocysteine-specific translation elongation factor from Methanococcus maripaludis S2

Subject, 394 a.a., hypothetical protein from Alteromonas macleodii MIT1002

 Score =  139 bits (349), Expect = 2e-37
 Identities = 94/283 (33%), Positives = 152/283 (53%), Gaps = 22/283 (7%)

Query: 5   NINLGIFGHIDHGKTTLSKVLTEIASTSAH---------DKLPESQKRGITIDIGFSAFK 55
           ++N+G  GH+DHGKTTL+  +T + S +           D  PE + RGITI      + 
Sbjct: 12  HVNVGTIGHVDHGKTTLTAAITTVLSKTYGGNAQAFDQIDNAPEEKARGITISTSHVEYD 71

Query: 56  LENYRITLVDAPGHADLIRAVVSAADIIDLALIVVDAKEGPKTQTGEHMLILDHFNIP-I 114
                   VD PGHAD ++ +++ A  +D  ++VV A +GP  QT EH+L+     IP I
Sbjct: 72  TPTRHYAHVDCPGHADYVKNMITGAAQMDGGILVVAATDGPMPQTREHILLGRQVGIPYI 131

Query: 115 IVVITKSDNAGTEE-IKRTEMIMKSILQSTQNLKNS-SIIPISA-KTGFGVEELKNLIIN 171
           IV + K D    EE ++  EM ++ +L   +   +   +I  SA K   G  E +  II 
Sbjct: 132 IVFMNKCDMVDDEELLELVEMEVRELLNEYEFPGDDLPVIQGSALKALEGDAEWEKKIIE 191

Query: 172 TLNNA------EIIRNTESYFKMPLDHAFPIKGAGTVVTGTINKGIVKVGDELKVLPINM 225
            L  A      E  R  +  F +P++  F I G GTVVTG + +GI+KVG+E++++ I  
Sbjct: 192 -LGEALDSYIPEPERAIDKPFILPIEDVFSISGRGTVVTGRVEQGIIKVGEEVEIVGIKD 250

Query: 226 STKV--RSIQCFKESVMEAKAGDRVGMAIQGVESKQIYRGCIL 266
           +TK     ++ F++ + E +AG+ VG+ ++G +  ++ RG +L
Sbjct: 251 TTKTTCTGVEMFRKLLDEGRAGENVGVLLRGTKRDEVERGQVL 293