Pairwise Alignments

Query, 384 a.a., 50S ribosome-binding GTPase from Methanococcus maripaludis S2

Subject, 320 a.a., LSU ribosomal maturation GTPase RbgA (B. subtilis YlqF) from Variovorax sp. SCN45

 Score = 91.3 bits (225), Expect = 3e-23
 Identities = 81/284 (28%), Positives = 136/284 (47%), Gaps = 37/284 (13%)

Query: 21  RRMVHKIIYECNIVLLVVDARDPETTRNRALEEYTIEKNKKLIYVINKSDLVPKKILEKW 80
           ++ + + + + ++V+ ++DAR P ++ N  L E T  +    + V+NK DL   +   +W
Sbjct: 14  QKAITERVKDIDVVIELLDARLPGSSANPMLAELTARRPS--LKVLNKQDLADPERTVRW 71

Query: 81  KNKFKSENPDSSVVFVSAKEKLGTKMLRDEIKTYLNSNN---IKYGQVGIVGYPNVGKSS 137
              + +  PD+  + + A +    + L       L+ N     K  +V I G PNVGKS+
Sbjct: 72  LAHYNAL-PDTRAIGLDASQTTPAQQLVKACHE-LSPNRGGMAKPMRVLICGIPNVGKST 129

Query: 138 IINALTGKKSARSGLTAGLTVGEQWVKLTKDIKLLDSPG-----IIEPKDEDELVISGAL 192
           +IN LTG + A++G  AG+T  EQ + L  D  L D+PG     II PK    L  SGA+
Sbjct: 130 LINTLTGGRKAKTGDEAGITKLEQRITLADDFYLWDTPGMLWPRIIVPKSGYNLAASGAV 189

Query: 193 RYEKADDIISPALKILNRIHTFDNTILKEYYGFEIGEEINI--------------ELLEK 238
               A D    AL++LN         LK +YG  +     +               LL+ 
Sbjct: 190 G-RNAFDEEEVALELLN--------YLKVHYGAGVAARFKLVELDAPTMAEMKDEALLDT 240

Query: 239 IGTKLNFLTKDGKIDIDRTSKSIIREFQNGKLNYHRMNLKKYEQ 282
           IG K   L   G++++ + ++ ++ EF+ G L   R+ L+  E+
Sbjct: 241 IGRKRGALLGKGRVNLQKAAEIVMHEFRAGNLG--RITLETPEE 282