Pairwise Alignments

Query, 373 a.a., chorismate synthase from Methanococcus maripaludis S2

Subject, 361 a.a., chorismate synthase from Escherichia coli ECOR38

 Score =  291 bits (744), Expect = 2e-83
 Identities = 159/363 (43%), Positives = 223/363 (61%), Gaps = 22/363 (6%)

Query: 2   NTFGDNFRVTTWGESHGKALGAVIDGCPANLPILEEDIQNELNRRRPGYSIFSTPRKEED 61
           NT G  FRVTT+GESHG ALG ++DG P  +P+ E D+Q++L+RRRPG S ++T R+E D
Sbjct: 4   NTIGQLFRVTTFGESHGLALGCIVDGVPPGIPLTEADLQHDLDRRRPGTSRYTTQRREPD 63

Query: 62  MLEILSGIFEGKTTGTPISGLVFNKGQKSKDYSKIKDTPRPGHADLNYFLKYGNYDYRGG 121
            ++ILSGIFEG TTGT I  L+ N  Q+S+DYS IKD  RPGHAD  Y  KYG  DYRGG
Sbjct: 64  QVKILSGIFEGVTTGTSIGLLIENTDQRSQDYSAIKDVFRPGHADYTYEQKYGLRDYRGG 123

Query: 122 GRSSGRTTIGNVIGGAVAKKLIEFTHNIKIIGYSTKIGKINGDFDYYKNPEFFESDSNIE 181
           GRSS R T   V  GA+AKK +     I+I G  T++G I  +                 
Sbjct: 124 GRSSARETAMRVAAGAIAKKYLAEKFGIEIRGCLTQMGDIPLEI---------------- 167

Query: 182 KLFEKTENNPLRCPSKNSDEMKDYVLDAMDKK-DSVGGIIEIIIKGIPQGVGNPVFNKLE 240
           K + + E NP  CP  +  +  D ++ A+ K+ DS+G  + ++  G+P G+G PVF++L+
Sbjct: 168 KDWSQVEQNPFFCPDPDKIDALDELMRALKKEGDSIGAKVTVVASGVPAGLGEPVFDRLD 227

Query: 241 GKLGSAFIGINAVKGFEIGRGFESSDLYGSEMNDEYYIDENSINEKTNNAGGIIGGISTG 300
             +  A + INAVKG EIG GF+   L GS+  DE   D      ++N+AGGI+GGIS+G
Sbjct: 228 ADIAHALMSINAVKGVEIGDGFDVVALRGSQNRDEITKD----GFQSNHAGGILGGISSG 283

Query: 301 SPVVLRVSIKPTPSISKIQDSVNLISNENEKIEIGGRHDPIIVPRVIPVLESMAAITVAD 360
             ++  +++KPT SI+    ++N    E E I   GRHDP +  R +P+ E+M AI + D
Sbjct: 284 QQIIAHMALKPTSSITVPGRTINRFGEEVEMI-TKGRHDPCVGIRAVPIAEAMLAIVLMD 342

Query: 361 LMI 363
            ++
Sbjct: 343 HLL 345