Pairwise Alignments

Query, 178 a.a., 30S ribosomal protein S4 from Methanococcus maripaludis S2

Subject, 206 a.a., 30S ribosomal protein S4 from Escherichia coli HS(pFamp)R (ATCC 700891)

 Score = 44.7 bits (104), Expect = 1e-09
 Identities = 33/134 (24%), Positives = 59/134 (44%), Gaps = 42/134 (31%)

Query: 20  GERIQKEKEISQKYGLVNKKELWKMETQLRNYRRQARKLISDTTTQGGKEAVQLFNVLKR 79
           G ++++++++ + YG+        +E Q RNY ++A +L  +T                 
Sbjct: 52  GVQLREKQKVRRIYGV--------LERQFRNYYKEAARLKGNTGE--------------- 88

Query: 80  YAILIEEEPTLDHVLSLNIESILERRLQTIVFRKGLAKTPKQARQFIVHGHIAVNGKRVT 139
                            N+ ++LE RL  +V+R G   T  +ARQ + H  I VNG+ V 
Sbjct: 89  -----------------NLLALLEGRLDNVVYRMGFGATRAEARQLVSHKAIMVNGRVVN 131

Query: 140 APAYLISVAENDAI 153
             +Y   V+ ND +
Sbjct: 132 IASY--QVSPNDVV 143