Pairwise Alignments

Query, 533 a.a., lysine--tRNA ligase from Methanococcus maripaludis S2

Subject, 526 a.a., Lysyl-tRNA synthetase (class I) (EC 6.1.1.6) from Sphingobium sp. HT1-2

 Score = 98.6 bits (244), Expect = 5e-25
 Identities = 127/525 (24%), Positives = 216/525 (41%), Gaps = 41/525 (7%)

Query: 3   WADATSEKIMKK--RNAEE---YVVSSGITPSGHIHIGNARETLTADAVYKGM-LKKGAE 56
           W    + K++K+    A E    +  +G  PSG  HIG   E L    V           
Sbjct: 17  WPYEEARKLLKRYPNGAPEKGHILFETGYGPSGLPHIGTFNEVLRTTMVRNAYHALSDIP 76

Query: 57  AKLIFIADDYDPLRKLYPFLPKE--FEKYIGMPLSEIPCPQGCCKSYADHFLMPFLNSLE 114
            +L+  +DD D  RK+   +P +    +Y+G PL+++P P    +S+A H        L+
Sbjct: 77  TRLVAFSDDLDGFRKVPDNVPNQAMLAEYLGKPLTQVPDPFEKYESFAHHNNAMLREFLD 136

Query: 115 DLGVEITTHRANECYKAGMYNDAIITALENRLKIKE-LLDSYRKEPLADDWYPLNVVCEK 173
             G +     A E Y+AG +++A+   L     I + +L + RKE  A  + P+  +  K
Sbjct: 137 SFGFDYEFVSATEQYRAGAFDEALRQVLRRYQAIMDIMLPTLRKERQA-TYSPVLPISPK 195

Query: 174 CGKMHETKVINYNSEDKTITYVCKCGFENTVKPFNGIGKLPWRVDWPARWNIFGVTAEPM 233
            G + +  V   ++E   + +V + G         G  KL W+VDW  RW   GV  E  
Sbjct: 196 SGIVLQVPVEVVDAEAGIVRFVDE-GETIEQSILGGGAKLQWKVDWAMRWYALGVDYEMA 254

Query: 234 GKDHAASGGSYDTGIKIARQIFNYQAPEKMVYEWIQLKVGDKAMPMSSSSGVVFAVKDWT 293
           GKD      S     KI R +   + PE   YE    + G+K   +S S G   +++ W 
Sbjct: 255 GKDLI---DSVTQSSKICRAL-GGRPPEGFNYEMFLDEKGEK---ISKSKGNGLSLEQWL 307

Query: 294 EICHPEVLRFLILKGKPTKHIDFDLKAISNLVDDYDELERKYFELIEKQKTEELNDNENE 353
                E L F   + +P K     +  I   VD+Y +    Y     KQ  E+   N   
Sbjct: 308 TYGPQESLAFYAYR-EPKKAKQLHMGVIPRAVDEYWQFRGNY----PKQAIEQQLGN--- 359

Query: 354 KISLYELVTPKIPERLPLQVAYRFCSIIAQIALDKETQKIDMERVFDILGRNGYNPAEFS 413
              ++ +   K+P+    ++   F  ++  + +  E  +   E+V+  L    Y P   +
Sbjct: 360 --PVHHIHDGKLPQG---ELPVTFGLLLNLVGVMGEASR---EQVWSYL--QNYVPGASA 409

Query: 414 EYDKSRLEKRLYMSKKWASDYGENLEINDLDQAKEQYETLSEEQKAWLKAFSKEVENIEI 473
           E     L+  +  +  +  D+           A E       +++          E+I+ 
Sbjct: 410 E-TYPELDALIGHALAYHRDFVAPTLQRRAPHANEAAALAKLDEELAALPADASAEDIQ- 467

Query: 474 DANTIHELMYETATKLNLAPKEAFVASYKILLGKNYGPKLGSFLA 518
             N ++ +  E A       ++ F A Y+ LLG + GP++GSF+A
Sbjct: 468 --NIVYAIGKEEAFGF-AELRDWFKALYQTLLGADQGPRMGSFIA 509