Pairwise Alignments

Query, 52 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 397 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

 Score = 53.1 bits (126), Expect = 1e-12
 Identities = 22/49 (44%), Positives = 31/49 (63%), Gaps = 1/49 (2%)

Query: 3   ILDKCVGCAGCVPFCPVGAISAFG-KAEIDTEMCTNCAVCKDYCPLDAI 50
           + + CVGC  C+  CPVGA+S  G KA +D + C  C++C   CP +AI
Sbjct: 131 VTEDCVGCGVCISECPVGALSIEGEKAVVDKDSCIYCSICAQTCPWNAI 179



 Score = 41.6 bits (96), Expect = 4e-09
 Identities = 17/46 (36%), Positives = 22/46 (47%)

Query: 5   DKCVGCAGCVPFCPVGAISAFGKAEIDTEMCTNCAVCKDYCPLDAI 50
           D C+GC  C   CP   I       +  + C  C +CK  CP+DAI
Sbjct: 201 DLCIGCGDCTDKCPRDLIVLNEMVAVPPKGCPACGLCKAACPVDAI 246



 Score = 41.2 bits (95), Expect = 6e-09
 Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 11/57 (19%)

Query: 5   DKCVGCAGCVPFCPVGAISAFGKAE-----------IDTEMCTNCAVCKDYCPLDAI 50
           D C+ C+ C   CP  AI   GK             +D+++C  C  C D CP D I
Sbjct: 162 DSCIYCSICAQTCPWNAIFVAGKKSPKRDKNIVKFSVDSDLCIGCGDCTDKCPRDLI 218



 Score = 37.4 bits (85), Expect = 8e-08
 Identities = 20/58 (34%), Positives = 23/58 (39%), Gaps = 13/58 (22%)

Query: 7   CVGCAGCVPFCPVGAISAFGKAE-------------IDTEMCTNCAVCKDYCPLDAIS 51
           CVGC  CV  CP   +   G  E               TE C  C VC   CP+ A+S
Sbjct: 94  CVGCMKCVDACPDSYVGMEGVVEPAKRNITLPKEPIAVTEDCVGCGVCISECPVGALS 151



 Score = 35.0 bits (79), Expect = 4e-07
 Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 9/53 (16%)

Query: 7   CVGCAGCVPFCP-----VGAISAFGKA----EIDTEMCTNCAVCKDYCPLDAI 50
           C+ C  CV  CP     +G I   GK     E    +C +C  C + CP D +
Sbjct: 310 CIRCGACVQSCPNDALRIGKIIHNGKEYERIEFSPNLCDSCGKCIETCPYDML 362



 Score = 32.7 bits (73), Expect = 2e-06
 Identities = 16/58 (27%), Positives = 22/58 (37%), Gaps = 12/58 (20%)

Query: 5   DKCVGCAGCVPFCPVGAISAFGKAEIDT------------EMCTNCAVCKDYCPLDAI 50
           +KC  C  C   CP  AI+      ++             +MC  C  C   CP DA+
Sbjct: 268 EKCAYCGPCAIKCPNNAITVVNPKGLEMPSRKKTEKANEFKMCIRCGACVQSCPNDAL 325



 Score = 30.4 bits (67), Expect = 1e-05
 Identities = 13/40 (32%), Positives = 17/40 (42%), Gaps = 1/40 (2%)

Query: 7   CVGCAGCVPFCPVGAISAFGKAEIDTE-MCTNCAVCKDYC 45
           C  C  C+  CP   +   GK+E   E  C  C  C + C
Sbjct: 347 CDSCGKCIETCPYDMLKLTGKSEKPLEGFCVMCLKCIEAC 386



 Score = 28.1 bits (61), Expect = 5e-05
 Identities = 17/56 (30%), Positives = 20/56 (35%), Gaps = 11/56 (19%)

Query: 7   CVGCAGCVPFCPVGAISAFGKAEI-----------DTEMCTNCAVCKDYCPLDAIS 51
           C  C  C   CPV AI    +              D E C  C  C   CP +AI+
Sbjct: 231 CPACGLCKAACPVDAIELVVEYASPKPITDEGIVWDEEKCAYCGPCAIKCPNNAIT 286



 Score = 27.7 bits (60), Expect = 6e-05
 Identities = 13/47 (27%), Positives = 20/47 (42%), Gaps = 5/47 (10%)

Query: 5  DKCVGCAGCVPFCPVGAISAFGKAEIDTEMCTNCAVCKDYCPLDAIS 51
          + C  C  C   CP  A+          ++C  C  C + CP DA++
Sbjct: 7  EDCYMCKACENSCPTEALKLN-----PFKVCQLCGNCVNVCPNDALN 48



 Score = 27.3 bits (59), Expect = 8e-05
 Identities = 16/43 (37%), Positives = 16/43 (37%), Gaps = 7/43 (16%)

Query: 6   KCVGCAGCVPFCPVGAISAFGKAEID--TEMCTNCAVCKDYCP 46
           KC  C  CV  CP        K E D     C  C  C D CP
Sbjct: 68  KCDLCGECVKVCPNNL-----KIENDKLKGFCVGCMKCVDACP 105



 Score = 26.9 bits (58), Expect = 1e-04
 Identities = 9/22 (40%), Positives = 15/22 (68%)

Query: 29 EIDTEMCTNCAVCKDYCPLDAI 50
          +I+TE C  C  C++ CP +A+
Sbjct: 3  KINTEDCYMCKACENSCPTEAL 24