Pairwise Alignments

Query, 380 a.a., class I SAM-dependent rRNA methyltransferase from Methanococcus maripaludis S2

Subject, 390 a.a., class I SAM-dependent rRNA methyltransferase from Rhodanobacter sp000427505 FW510-R12

 Score =  121 bits (303), Expect = 4e-32
 Identities = 104/347 (29%), Positives = 156/347 (44%), Gaps = 17/347 (4%)

Query: 44  GNFVAKALYD--PKFPLIKILTRENEEIDKDFFFKRINNANNYRTDILNY---KDTYRMI 98
           G FV +AL++   +  L  + T  +  ID D+   RI  A   R D L      D +R++
Sbjct: 48  GRFVGRALWNGHARIALRLLDTHADAVIDADWIAARIARAVQLRRDWLQLDAVSDAWRVV 107

Query: 99  YAEADYLPSIILDKYNKIASIQISSKIMDNYSDLIFECISEITDVETMYVQSGKKGSDVK 158
           ++E D L  +I+D+Y  +  I+  +  M  + + I   +  +T      +    +    K
Sbjct: 108 HSEGDGLSGLIVDRYADVLVIEYFAAGMWRFREAIHTAL--LTHFPGAQLYWFAESHVQK 165

Query: 159 TKIFGDKS---QIETVISEGNAKFNVNM-KGHKTGFFLDQRDNRIDLENYVKPGDKVLDI 214
            + F  +S        + E   +F+     GHKTGFF DQRDNR       K   +VLD+
Sbjct: 166 QESFDCRSPEVPAPFEVHEHGLRFHAAPGLGHKTGFFADQRDNRKRFAELAK-DRRVLDL 224

Query: 215 CSYTGGFAVHAGIKGG-EVTAVDLSEKALAVAEENMELNRVKNYNCMVSNAFDAMKEMIK 273
           C   GGFAVHA   G  E   VDL    L VA  N   N V       ++ FD ++  + 
Sbjct: 225 CCNAGGFAVHAMAAGAREAVGVDLDASILEVARANAAANNVA-ATFEQADIFDWVRAAVT 283

Query: 274 NNEKFDVVVLDPPAFTDSSKDIKNALNAYNSMNYLGLKLAK--RILVTCSCSHHIDRESF 331
             E++D VVLDP   T     + +AL  Y +MN + L +     +L+TCSC+  +    F
Sbjct: 284 RGERYDAVVLDPAKLTRDRSKVMDALKKYFAMNRMVLDIIPPGGLLLTCSCTGLVGEAEF 343

Query: 332 KHTIVSSSLRAKKEIRQIGSYRTQAPDHIITMANKDLEYLKCLFFNV 378
              +   +L A +EI Q+   R    DH       +  YLK  F  V
Sbjct: 344 LEMLRRVALNAGREI-QVLEVRGPGADHPFRTDVPEGRYLKAAFCRV 389