Pairwise Alignments

Query, 380 a.a., class I SAM-dependent rRNA methyltransferase from Methanococcus maripaludis S2

Subject, 398 a.a., ribosomal RNA large subunit methyltransferase I from Pseudomonas putida KT2440

 Score =  154 bits (390), Expect = 3e-42
 Identities = 100/330 (30%), Positives = 173/330 (52%), Gaps = 22/330 (6%)

Query: 60  KILTRENE-EIDKDFFFKRINNANNYRTDILNYKDTYRMIYAEADYLPSIILDKYNKIAS 118
           ++L+R+ +  +DK     R+N A + R  +   +  YR++Y ++D LP +++D++  I  
Sbjct: 68  RLLSRDIKLPLDKSLLVHRLNVALSLRERLFE-QPCYRLVYGDSDLLPGLVVDRFFDILV 126

Query: 119 IQISSKIMDNYSDLIFECISEITDVETMYVQSGKKGSDVKTKIFGDKSQIETV------- 171
           +Q++S  M+ + D +   + ++     +  ++     D +    G +  +ETV       
Sbjct: 127 VQLASATMEAHKDDVIAALVQVLKPSGILFKNDSAARDAE----GLQRYVETVYGEVPDW 182

Query: 172 --ISEGNAKFNVNMK-GHKTGFFLDQRDNRIDLENYVKPGDKVLDICSYTGGFAVHAGIK 228
             + E   KF   ++ G KTG+F D R NR  L  YVK G +VLD+ SY GG+ V AG  
Sbjct: 183 VPLEENGVKFEAPVREGQKTGWFYDHRMNRARLAPYVK-GKRVLDLFSYIGGWGVQAGAF 241

Query: 229 GG-EVTAVDLSEKALAVAEENMELNRV-KNYNCMVSNAFDAMKEMIKNNEKFDVVVLDPP 286
           G  EV  VD S  AL   E N  LN + +   C+  + F+A++E+    E+FDV++ DPP
Sbjct: 242 GASEVFCVDASGFALDGVERNAALNGISEKLTCIEGDVFEALRELKAAEERFDVIIADPP 301

Query: 287 AFTDSSKDIKNALNAYNSMNYLGLKLAKR--ILVTCSCSHHIDRESFKHTIVSSSLRAKK 344
           AF    KD+KN   AY  +N   +++  +  ILV+ SCS H+  +   + +++S+    +
Sbjct: 302 AFIKRKKDLKNGEAAYRRLNEQAMRMLNKDGILVSASCSMHLPEDDLNNILLTSARHLDR 361

Query: 345 EIRQIGSYRTQAPDHIITMANKDLEYLKCL 374
            + Q+     Q PDH +  A  +  Y+K +
Sbjct: 362 NM-QLLERGGQGPDHPVHPAIAETRYIKSI 390