Pairwise Alignments

Query, 380 a.a., class I SAM-dependent rRNA methyltransferase from Methanococcus maripaludis S2

Subject, 394 a.a., RlmI/RlmK family 23S rRNA methyltransferase from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  154 bits (390), Expect = 3e-42
 Identities = 119/379 (31%), Positives = 201/379 (53%), Gaps = 20/379 (5%)

Query: 12  SLKNFSNIIYKNAIVNKDDFSKTEEIVDI-TYNGNFVAKALYDPKFPLIKILTRENEEID 70
           SLK     ++  AI   D      ++V++ +    F+    Y P    ++I + E  E D
Sbjct: 15  SLKRQHPWVFSGAIRKADGELAEGDVVEVYSSKREFLGMGHYAPGSIAVRIFSFEQAEPD 74

Query: 71  KDFFFKRINNANNYRT--DILNYKDT--YRMIYAEADYLPSIILDKYNKIASIQISSKIM 126
             F+ +++  A +YR    ++N  +T  YR++YAE D +P +I+D Y   A +Q  +  M
Sbjct: 75  YAFWKQKVQKAYDYRQRLGLVNNPNTDVYRLVYAEGDGVPGLIVDFYKDTAVVQTHTVGM 134

Query: 127 DNYSDLIFECISEITD--VETMYVQSG-----KKGSDVKTKIFGDKSQIETVISEGNAKF 179
            +    + + + EI    +  +Y +S      K   + +      +S+   V++E   +F
Sbjct: 135 YSVRGHVSQALQEIYGDRLRAVYDKSAESLPPKAPVEAQNGYLYGQSEGGVVVTENGNRF 194

Query: 180 NVNMK-GHKTGFFLDQRDNRIDLENYVKPGDKVLDICSYTGGFAVHAGIKGG-EVTAVDL 237
            ++ + G KTGFF+DQR+NR  L  YV+ G  VL+   YTGGF+V+A   G  EV +VD+
Sbjct: 195 YIDWETGQKTGFFIDQRENRDLLARYVQ-GKAVLNTFCYTGGFSVYALNAGAKEVHSVDV 253

Query: 238 SEKALAVAEENMELNRVKNYNCMVSNAFDAMKEMIKNNEKFDVVVLDPPAFTDSSKDIKN 297
           S+KA+ +  +N EL++    +   + A D  + +    + +DV+VLDPPAF  S K   N
Sbjct: 254 SKKAIELTVKNGELSQAPEKH--EAYAVDTFEFLKGKEDMYDVIVLDPPAFAKSQKVRHN 311

Query: 298 ALNAYNSMNYLGLKLAK--RILVTCSCSHHIDRESFKHTIVSSSLRAKKEIRQIGSYRTQ 355
           AL  Y  +N   +K  K   IL T SCS  +D+  F +TI+++++ A + I+ I  + +Q
Sbjct: 312 ALMGYKRLNAEAMKKIKPGGILFTFSCSQVVDKYLFNNTIMAAAIEAGRNIK-IMHHLSQ 370

Query: 356 APDHIITMANKDLEYLKCL 374
             DH I++ + + EYLK L
Sbjct: 371 PADHPISIFHPEGEYLKGL 389