Pairwise Alignments

Query, 380 a.a., class I SAM-dependent rRNA methyltransferase from Methanococcus maripaludis S2

Subject, 401 a.a., class I SAM-dependent rRNA methyltransferase from Magnetospirillum magneticum AMB-1

 Score =  130 bits (327), Expect = 6e-35
 Identities = 98/327 (29%), Positives = 161/327 (49%), Gaps = 19/327 (5%)

Query: 64  RENEEIDKDFFFKRINNANNYRTDILNYKDTYRMIYAEADYLPSIILDKYNKIASIQISS 123
           R  + +D DF  +R+  A   R D L     YR++++EAD LP +I+D+Y  + ++Q ++
Sbjct: 81  RAADTVDVDFLAERLRAALALR-DTLFPTPHYRLVHSEADRLPGLIVDRYGDVLAVQTNT 139

Query: 124 KIMDNYSDLIFECISEITDVETMYVQSGK-----KGSDVKTKIFGDKSQIETVISEGNAK 178
             M+    ++ + +  +     + + +       +G +    +   +      + E   +
Sbjct: 140 AGMERLLPVLLDALQMVLAPRAVVLVNDSPVRKLEGLEPHHDVAFGQVDGPVELEENGCR 199

Query: 179 FNVNMKG-HKTGFFLDQRDNRIDLENYVKPGDKVLDICSYTGGFAVHAGIKGGEVT-AVD 236
           F  ++ G  KTG+F DQRDNR  +    K G +VLD+ +Y GGFAV A   G   T AVD
Sbjct: 200 FVADLTGGQKTGWFFDQRDNRAFVARLAK-GRRVLDLYTYAGGFAVQAAKAGATQTIAVD 258

Query: 237 LSEKALAVAEENMELNRVKNYNCMVSNAFDAMKEMIKNNEKFDVVVLDPPAFTDSSKDIK 296
            SE +LA+A++   LN V+    + + AF  M+ +    E+F +VV DPPAF  S KD+ 
Sbjct: 259 RSEHSLALADQAARLNGVE-VQTVRAEAFAEMERLALAGERFGLVVADPPAFVKSRKDLG 317

Query: 297 NALNAYNSMNYLGLKLAK--RILVTCSCSHHIDRESFKHTI---VSSSLRAKKEIRQIGS 351
                Y  M  L   L +    L+  SCSHH+  E+F   I   +  + R+ + +R  G+
Sbjct: 318 AGAKGYRKMARLAAALVEPGGFLLCASCSHHMPVETFAEEIGHGLHLAGRSGRILRSAGA 377

Query: 352 YRTQAPDHIITMANKDLEYLKCLFFNV 378
               A DH +     +  YLK   F +
Sbjct: 378 ----ASDHPVHPWLPESAYLKAQVFQL 400