Pairwise Alignments

Query, 380 a.a., class I SAM-dependent rRNA methyltransferase from Methanococcus maripaludis S2

Subject, 702 a.a., 23S rRNA (guanine-N-2-) -methyltransferase rlmL EC 2.1.1.-) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 70.1 bits (170), Expect = 2e-16
 Identities = 47/124 (37%), Positives = 69/124 (55%), Gaps = 4/124 (3%)

Query: 172 ISEGNAKFNVNMKGH-KTGFFLDQRDNRIDLENYVKPGDKVLDICSYTGGFAVHAGIKGG 230
           +SE NA+  VN+  +  TG FLD R  R  L    K G   L++ SYTG  +VHAG+ G 
Sbjct: 503 VSEYNARLWVNLTDYLDTGLFLDHRIARRMLGEMSK-GKDFLNLFSYTGSASVHAGLGGA 561

Query: 231 E-VTAVDLSEKALAVAEENMELNRVKNYNCMVSNAFDAMKEMIKNNEKFDVVVLDPPAFT 289
              T VD+S   L  AE N+ LN +      +  A D +  + + NE+FD++ +DPP F+
Sbjct: 562 RSTTTVDMSRTYLEWAERNLRLNGLSGRAHRLIQA-DCLGWLREANEQFDLIFIDPPTFS 620

Query: 290 DSSK 293
           +S +
Sbjct: 621 NSKR 624