Pairwise Alignments

Query, 380 a.a., class I SAM-dependent rRNA methyltransferase from Methanococcus maripaludis S2

Subject, 310 a.a., putative adenine-specific methylase (VIMSS) from Escherichia coli BW25113

 Score = 46.6 bits (109), Expect = 9e-10
 Identities = 38/123 (30%), Positives = 63/123 (51%), Gaps = 19/123 (15%)

Query: 206 KPGDKVLDICSYTGGFAVHAG--IKGGEVTAVDLSEKALAVAEENMELNRVKNYNCMVSN 263
           K    +LD+C+ +G  A+         EV AVD+S  ALAVAE+N+E       + ++ N
Sbjct: 131 KQPQHILDMCTGSGCIAIACAYAFPDAEVDAVDISPDALAVAEQNIE------EHGLIHN 184

Query: 264 AFDAMKEMIKNNEK--FDVVVLDPPAFTDSSKDIKNALNAYNSMNYL-------GLKLAK 314
                 ++ ++  K  +D++V +PP + D ++D+ +  N Y     L       GLKL +
Sbjct: 185 VIPIRSDLFRDLPKVQYDLIVTNPP-YVD-AEDMSDLPNEYRHEPELGLASGTDGLKLTR 242

Query: 315 RIL 317
           RIL
Sbjct: 243 RIL 245